Detail



ID : Ahg488897

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488897|fgenesh2_kg.6__2031__AT5G20000.1
Sequence
ATAACAAAAC CAAACGGCTG ATGAATATTC GGTTAATTTT GGGTCGTTTC GGTTATTTTT TTTTTCCGTC AAAGAAATAA AATTAAATTG AACTTAAAAA AAAAAGATGT CTTGTTGGAT AATCCAAGGT TCTGTTCTAT ATAGTAGGGT TTATTTGGTA ATGATCTTGG TCTCTGTGAT CTATCTTTGA ATCTCAAAAG CATACTAGAG AGAGAGATCT GTTTCGATAA TTTGCTGCAA TCACCGTGTT AATGGCGGCC GTAGGAGTGG AGACGAGGCC TCCTGTGACA ACGATGGAGG AAACCTGCAA CGTCAAGGGA GCGGCGGCGA AACAAGGGGA AGGGCTTAAG CAGTACTATC TCCAGCATAT CCATGAGCTC CAGCGTCTGC TCCGACAAAA GACGAACAAC CTTAATCGCC TTGAAGCTCA GAGGAATGAA CTCAATTCTA GAGTACGAAT GCTCAGAGAA GAGTTGCAAC TGCTTCAAGA ACCTGGGTCC TATGTGGGCG AAGTGGTAAA AGTGATGGGA AAAAACAAGG TCTTGGTTAA GGTTCATCCA GAGGGGAAAT ATGTTGTCGA TATTGACAAA AGTATAGACA TAACGAAACT CACTCCATCA ACGAGAGTTG CTCTCCGTAA TGATAGTTAT GTTCTCCACC TGGTTCTGCC AAGTAAGGTT GATCCCTTGG TTAACCTTAT GAAAGTTGAG AAGGTTCCAG ACTCCACATA TGACATGATT GGTGGTCTTG ACCAGCAAAT CAAGGAAATA AAGGAGGTCA TTGAGCTGCC AATCAAGCAT CCTGAATTGT TTGAGTCTCT TGGAATTGCA CAGCCAAAGG GTGTGTTGTT ATACGGTCCA CCTGGAACTG GGAAGACACT ACTGGCTCGG GCTGTGGCAC ATCACACAGA CTGTACTTTC ATCAGAGTTT CTGGATCCGA GCTGGTACAG AAATACATTG GAGAAGGTTC TAGAATGGTC AGAGAACTTT TTGTGATGGC AAGGGAGCAT GCACCATCAA TCATCTTCAT GGATGAAATC GATAGTATCG GGTCTGCTCG TATGGAATCT GGAAGTGGAA ATGGTGACAG TGAGGTTCAA AGGACTATGC TTGAGCTTCT CAATCAACTT GACGGATTCG AAGCGTCAAA CAAAATCAAG GTTCTGATGG CGACAAATCG TATTGATATT CTGGATCAAG CTCTTCTTAG GCCTGGAAGG ATTGATAGGA AAATTGAATT CCCTAATCCT AATGAAGAGT CACGTTTTGA TATCTTGAAG ATACACTCGA GGAAAATGAA TTTGATGCGT GGAATCGATC TGAAAAAGAT TGCAGAGAAG ATGAATGGTG CTTCAGGTGC TGAGCTGAAG GCTGTGTGCA CGGAGGCGGG CATGTTTGCG CTGCGGGAGA GGAGAGTTCA CGTGACACAA GAAGACTTTG AGATGGCGGT GGCCAAGGTA ATGAAGAAAG ACACAGAGAA GAACATGTCT CTGCGTAAGC TCTGGAAGTA GGAATCTCAG AGCAAAGGAT TGAATTCATT TAGGTTTCCT TTACTGTCTG TGGTTCTTTC TGAAACCTTT TCGGTTGGCG CTTTAAGCTC TTCGAAACAA AGTTTGTACA CTAGTTTATA TTCAAATGGT GGTTCAGCAT AACAGCTTCC ATTTAACCAA GCTTACATTT 
Length1680
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8063939.. 8067487
Download Sequence
A.thaliana
AGI-codeAT5G20000.1
DescriptionAAA-type ATPase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg477585 DegP protease 7
10.6301 Ahg490263 Mitochondrial transcription termination factor family protein
12 Ahg943696 NAD-dependent malic enzyme 2
12.1655 Ahg495887 MIF4G domain-containing protein / MA3 domain-containing protein
18.9737 Ahg485358 casein kinase II, alpha chain 2
25.8263 Ahg945389 protein phosphatase X 1
29.3258 Ahg350459
30.6594 Ahg476539 signal peptide peptidase
35.2278 Ahg938338 Transducin/WD40 repeat-like superfamily protein
38.4968 Ahg924144 Ribosomal protein S5/Elongation factor G/III/V family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression