Detail



ID : Ahg490020

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490020|fgenesh2_kg.6__3154__AT4G12030.2
Sequence
TCTCTTTCTC TCTTTAGTCT CAAGCAAGAA AAATGGGTGT GATCTCTCCG ATTGAGACTC TGTTCTTAAA GTCTCAACAT CGTCTTCTTC AACCTCGAAA CTACTCCTAC CCACTTGTTT TTCACAACAC TCGACGAGTT GCGACTTTCC CATGCAACAG CTTCTCATTC TCTTCTCTAG GATCATGCTC TGTAGATTTT CCACTACGAA GTAACCTGAT TTCGCAAAAT GGAAAGTCAA GTTATCCTTG GCGGAGATAT GTATCCGAAT CTGACTCAAA CGAGATGTAC CATAAGAAGG TTTCTTCTAT AATGGAAACA TTAAAGCAAG CCAACTCTTT TATTCCTCAT GCAATTCTCT TAAGTACAAT CTTAGCTCTT CTCTATCCAC CTTCTTTTAC ATGGTTCAAG CCAAGGTACT TTGTGCCTGG TTTAGGTTTC ATGATGTTTG CAGTTGGAAT CAACTCGAAC GAAAAAGACT TTCTCGAAGC TCTTAAAAGA CCAGATGCTA TTTTTGCCGG TTACATCGGA CAATACTTGA TAAAACCTCT CTTAGGTTAC ATTTTCGGCG TAATTGCTGT CTCTCTTTTC AATCTACCTA CTTCTATAGG TGCTGGAATT ATGTTGGTCT CATGTGTTAG TGGAGCTCAG CTATCAAATT ACACAACTTT CTTGACCGAT CCTTCACTCG CGCCGCTTAG CATCGTCATG ACATCTGTCT CAACCGCTAC TGCGGTCCTC GTTACACCCA TGCTTTCACT TTTACTCATC GGTAAAAAGC TTCCCGTTGA TGTGATTGGG ATGATCTCTA GCATTCTCCA AGTCGTAGTT ACACCTATTG CCGCAGGACT ACTTCTTAAC CGGTTATTTC CAAGGTTGTC TAATGCAATC AAACCATTTC TCCCGGCGTT AACAGTTATC GATACGGCTT GTTGCATAGG AGCACCCCTT GCTTTGAACA TAGATTCAAT CTTGTCTCCG TTTGGTGCAA CCATCTTGTT CATCGTCATA ACGTTTCATC TCTTGGCTTT CGTCGCTGGT TACTTTTTCA CTGGTTTCTT CTTCAGCAAG GCACCTGATG TAAAAGCTCT ACAAAGAACA ATTTCTTATG AGACCGGAAT GCAAAGTAGT CTTCTCGCTC TGGCCCTAGC GACAAAGTTC TTTCAAGATC CTCTCGTTGG AGTGCCTCCA GCAATCTCCA CAGTAGTTAT GTCTCTAATG GGCGTCTCGC TTGTTACCAT ATGGAAAAAC AGAAAGGAGT AGTGCCATGA ACCCTAATTA GGGATTTTGC AGAATTTCTG TTGTTTATGG TCGGCTGTTC TAATTGTTTT TGTAATGGTC AGTTTATGGT TTCTTATAAA AGAACCAAGA GTTTACCCAT AAAAAGTTTA AAACGATTTC AATTTTGTTC TTGATCGGTT GTTATATTAA ACCAAAACAG AGCCAAGAAA GAAGAGAACA ATATTTACTA TTCATGTGTA AGACTTGTGA TATAAAGGTT GAGACTTTCA TGG 
Length1513
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20448216.. 20450325
Download Sequence
A.thaliana
AGI-codeAT4G12030.2
Descriptionbile acid transporter 5
TAIR curator summaryRequired for the biosynthesis of methionine-derived glucosinolates. Involved in the transport of 2-keto acids between chloroplasts and the cytosol.
Alias[BASS5][BAT5][BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5][bile acid transporter 5]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg927551 aspartate kinase 3
5.09902 Ahg920545 cytochrome p450 79f1
6.48074 Ahg941819 methylthioalkylmalate synthase 1
8.83176 Ahg488253 isopropylmalate dehydrogenase 1
8.94427 Ahg479487 Leucine-rich repeat protein kinase family protein
10.9545 Ahg312617 cytochrome P450, family 79, subfamily F, polypeptide 2
11.5326 Ahg941820 2-isopropylmalate synthase 2
11.6189 Ahg326599 2-isopropylmalate synthase 2
12.49 Ahg477565 glutathione S-transferase F11
14.3875 Ahg929873 branched-chain aminotransferase4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression