Detail



ID : Ahg920545

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920545|scaffold_101826.1
Sequence
CGCATACATA CATGATGATG ATGATGAGCT TTACCACATC ATTACCATAC CCTTTTCAAA TCCTACTAGT CTTTATCCTC TCCATGGCAT CAATCACTTT ACTGGGTCGA ATACTCTCAA GACCCACCAA AACCAAAGAC CAATCTCGCC AGCTTCCGCC TGGCCCACCA GGATGGCCCA TCCTCGGCAA TCTACCCGAA CTAATCATGA CTCGTCCTAG GTCCAAATAT TTCCGCCTTG CCATGAAAGA GCTAAAAACA GATATTGCAT GTTTCAATTT TGCCGGAACC CACACCATCA CCATAAACTC CGACGAGATC GCTAGAGAAG CGTTTAGAGA GAGAGACGCC GATTTGGCAG ACCGGCCTCA ACTTTTCATC ATGGAGACAA TCGGAGACAA TTACAAATCA ATGGGAATCT CGCCGTACGG TGAACAATTC ATGAAGATGA AAAGAGTGAT CACAACGGAA ATTATGTCCG TTAAAACGTT GAATATGTTG GAAGCTGCGA GAACCATCGA AGCGGATAAT CTCATTGCTT ACGTTCACTC CATGTATCAA CGGTCCGAGA CGGTCGATGT TAGAGAACTC TCGAGGGTTT ATGGTTACGC AGTGACCATG AGAATGTTGT TTGGAAGGAG ACATGTCACG AAAGAAAACG TGTTTTCCGA TGATGGGAGA CTAGGAAAAG CGGAAAAACA TCATCTTGAG GTGATTTTCA ACACTCTTAA CTGTTTACCA TCTTTTAGTC CAGCGGATTA CGTGGAACGA TGGTTGAGAG GTTGGAATGT TGATGGTCAA GAGAAGAGGG TTACAGTGAA TTGTAACATT GTTCGTAGTT ACAACAATCC CATAATTGAC GAGAGGGTCG AGTTATGGAG GGAAAAAGGT GGTAAGGCTG CTGTTGAAGA TTGGCTTGAT ACGTTCATTA CGTTAAAAGA TCGAAACGGA AAGTACTTGG TCACGCCAGA CGAAATCAAA GCTCAATGCG TTGAATTTTG TATAGCAGCG ATCGATAATC CGGCAAATAA CATGGAGTGG ACACTTGCGG AAATGTTAAA GAACCCGGAG ATTCTTAGAA ATGCTCTCAA GGAGTTAGAT GAAGTAGTTG GAAAAGACAG GCTTGTGCGA GAATCAGACA TACCAAATCT AAACTACTTA AAAGCTTGTT GTAGAGAAAC CTTCAGGATT CACCCAAGTG CTCATTATGT CCCTTCCCAT CTTGCCCGTC AAGATACCAC CCTTGGGGGT TATTTTATTC CCAAAGGTAG CCACATTCAT GTATCCCGCC CTGGACTAGG CCGGAACCCT AAAATATGGA AAGATCCATT GGTATACAAA CCCGAGCGTC ACCTCCAAGG AGACGGAATC ACAAAAGAGG TTACTCTGGT GGAAAAAGAG ATGCGTTTTG TCTCGTTTAG CACCGGTCGA CGTGGCTGCA TCGGTGTTAA AGTCGGGACG ATCATGATGG TTATGATGTT GGCTAGGTTT CTTCAAGGGT TTAACTGGAA TCTCCATAAA GATTTTGGAC CATTAAGCCT CGAGGAAGAT AATGCATCAT TGCTGATGGC TAAACCTCTT CTCTTGTCCG TTGAGCCACG CTTGGCACCA AACCTTTATC CAAAATTCCG CCCTTAAGAA GAAGAAAAAA ACAAGATGGT 
Length1660
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6561327.. 6563785
Download Sequence
A.thaliana
AGI-codeAT1G16410.1
Descriptioncytochrome p450 79f1
TAIR curator summarymember of CYP79F
Alias[BUS1][CYP79F1][SPS1][BUSHY 1][cytochrome p450 79f1][SUPERSHOOT 1]
Gene coexpression
MR
MR Locus Description
2 Ahg927551 aspartate kinase 3
3.74166 Ahg941820 2-isopropylmalate synthase 2
3.87298 Ahg312617 cytochrome P450, family 79, subfamily F, polypeptide 2
5.09902 Ahg490020 bile acid transporter 5
5.19615 Ahg487604 myb domain protein 29
5.65685 Ahg929873 branched-chain aminotransferase4
5.91608 Ahg326599 2-isopropylmalate synthase 2
6 Ahg941819 methylthioalkylmalate synthase 1
6.7082 Ahg479487 Leucine-rich repeat protein kinase family protein
8.3666 Ahg488253 isopropylmalate dehydrogenase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression