Detail



ID : Ahg490840

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490840|fgenesh2_kg.7__273__AT4G37760.1
Sequence
AGAGAAACAA GCCACGAGTT CGATTCATAG CCACAATAAT ATTTTTCGAT ATCCACGCGT CAATTTGTAA AACCAAAAAC GCACCTCTCT GTGTACGTTA ATGGCTCCGA GGATTGTCGT TGATCACTTT ATCCTCACAA CAACGTTTTT CGCCTCCTTG TTCGCGTTTC TGCTTCTATA CATCTTGCGT CGTCGGAGCA AGAAGATTCG TGGGTCTGTC AATGTCCGTA ACGGAACCCT AACGGTGAAA TCCGGAACAG GTGTCGATAT CATCATCGTC GGTGCTGGTG TCGCCGGCGC TGCCCTTGCT CATACCCTAG GAAAGGAAGG GAGAAGAGTT CACGTTATAG AAAGAGACTT AACTGAGCCT GACCGAATCG TCGGTGAATT GCTTCAGCCT GGTGGTTACT TGAAGTTAAT CGAACTCGGG CTTGAAGATT GTGTGAAGGA GATAGATGCG CAGAGAGTTC TTGGTTATGC TCTCTTTAAA GATGGGAAAC ACACTAAACT GTCTTACCCG TTGGATCAGT TTGATTCCGA TGTTGCGGGT CGTAGCTTTC ACAATGGGAG ATTTGTGCAG CGGATGCGAG AGAAAGCTTC TTCACTTCCC AATGTTCGAA TGGAGCAAGG AACAGTGACA TCGTTGGTGG AAGAAAACGG AATAATCAAA GGTGTTCAAT ACAAAACCAA AGATGGCCAA GAACTTAAAT CATTTGCTCC TCTCACTATT GTATGTGATG GTTGTTTCTC CAACTTGCGT CGATCTCTCT GCAAACCTAA GGTGGAGGTG CCATCCAATT TCGTGGGTCT GGTGTTGGAG AATTGCGAAC TCCCATTTCC GAACCACGGA CATGTTGTTC TCGGCGACCC ATCACCCATT TTATTCTATC CTATCAGCAG CTCGGAAGTC CGTTGCTTGG TTGATGTTCC AGGTTCAAAA CTTCCTTCAG TCGCAAGCGG CGAAATGGCT CACCATCTCA AAACAACAGT CGCACCCCAG GTACCGCCTC AAATCCGCGA TTCGTTCATT TCTGCGGTCG AAAAAGGTAA CATAAGAACA ATGCCTAACC GAAGCATGCC AGCCGACCCA ATTCATACAC CCGGAGCTCT GCTTTTAGGC GACGCATTCA ACATGCGCCA TCCTCTTACC GGAGGCGGTA TGACCGTCGC ATTGTCTGAT ATAGTCATCC TCCGCGATCT ATTAAACCCG CTCGTCGACT TAACCAACAA AGAGTCCTTA TCCAAATACA TCGAATCGTT CTACACGTTG CGAAAACCGG TTGCTTCGAC TATCAATACG CTCGCAGGAG CTCTTTACAA AGTCTTTTTG GCTTCTCCAG ACGATGCGAG AAGCGAAATG CGTCGAGCTT GCTTCGATTA TCTTAGCCTC GGAGGGGTTT GCTCCTCAGG ACCAGTGGCT TTGCTCTCAG GTTTGAACCC GCGACCTATG AGCCTTGTTC TTCATTTCTT CGCAGTTGCG ATTTTCGGGG TTGGTCGTTT GCTTGTACCT CTCCCTTCCG TCAAACGGTT ATGGCTCGGA GCGAGACTAA TCTCGAGTGC TTCAGGGATA ATATTTCCAA TAATAAAAGC AGAAGGTGTG AGGCAAATGT TCTTCCCTCG AACTATTCCT GCCATTTACA GAGCTCCTCC TACTCCTCCT CAATGATGAT GATTCAGATA CATTGCTTTG AAGCGTGGTT TGATTTGGTC TTTACGAACT TTGGTTTGAA ATTTGTACTC ATCCATTACA AACAAAATCA TCAAGTAAAT AAGTA 
Length1775
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1045410.. 1047842
Download Sequence
A.thaliana
AGI-codeAT4G37760.1
Descriptionsqualene epoxidase 3
TAIR curator summary
Alias[SQE3][squalene epoxidase 3]
Gene coexpression
MR
MR Locus Description
1 Ahg479172 high chlorophyll fluorescent 107
2.82843 Ahg938670 Calcium-dependent phosphotriesterase superfamily protein
3.31662 Ahg491203
3.4641 Ahg951334 ABC2 homolog 13
3.4641 Ahg930129 Major facilitator superfamily protein
4.89898 Ahg935667 circadian clock associated 1
5.09902 Ahg475445 Glutamyl-tRNA reductase family protein
5.2915 Ahg950218
5.91608 Ahg476523 B-box type zinc finger protein with CCT domain
6 Ahg922794 nitrate reductase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression