Detail



ID : Ahg490936

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490936|fgenesh2_kg.7__369__AT4G37180.2
Sequence
TTCTTCTTCT ATATATACGT CTTTAAGCTG CTTCTCTTTG TCTTTATCTT GTCCGTTTAT CCGAATGGTT CAAACAGAAA CAGATCAAAG GATGGGTCTT AATCTGAATT TGTCTATCTA CTCTTTACCA AAACCCTTAT CTCAATTTCT CGATCAAGTG TCGAGGATCA AAGACAATCA TTCGAAACTG TCTGAAATCG ATGGTTATGT CGGGAAATTA GAGGAAGAGA GAAAAAAAAT CGATGTTTTT AGAAGAGAAC TCCCTTTATG CATGCTCTTA TTGAACGAAG AAATTGTTTT TCTCTGTGTA GCGATTGAGG CGTTGAATGA AGAGGCTAGA AAAGGGTCAT CAGTGATGGC ATCAAATGGG AAATTCGATG AACGTGAAGG GGCAAAACCG GAAACTGATA AGAAGAGCTG GATGAGCTCT GCCCAGTTAT GGATCTCGAA CCCTAATTCT CAATTGCAAT CGACAAACGA AGAAGAAGAT CGGTGTGTGA GTCAGAACCC ATTTCAGACA TGTAATCAAG GAGGGGCATT TCTGCCATTT AACCCTCCTC CACCTCCTCC ACCACCAGCT CCTCTGTCTC TCATGACTCC AACATCAGAC ATGATGATGG ATTGTAGCAG AATTGAGCAG AATCATCATC ATCATCATCA GTTCAACAAA CCTTCTTCAC AGAGTCATCA CATTCAGAAG AAAGAGCAGA GAAGGAGATG GTCACAGGAA CTTCACCGTA AATTCGTTGA TGCTCTTCAC AGGCTTGGAG GGCCACAAGT GGCTACACCA AAGCAGATTA GAGATTTGAT GAAAGTTGAT GGTTTAACCA ATGATGAAGT CAAGAGTCAT TTACAAAAAT ATAGAATGCA TATCCGTAAG CATCCACTGC ATCCGACAAA GACTTTGTCA TCGTCGGATC AGCCCGGTGT GTTGTCAGAG AGAGAATCGC AGAGCTTAAT AAGTTTGTCG AGGTCGGATT CGCCACAAAG CCCACTTGTT GCAAGAGGGT TGTTCAGTAG TAATGTTGGT CATAGCTCAG AGGAAGATGA GGAGGAGGAT GAAGAAGAGG AGGAGAAATC TGATGGACGT AGTAGCTGTA GAAATGATGA AACAAAGAAG AAGAGACAAG TGTTGGATCT TGAGCTTTGA AAGTCGGCAT AGTGAAGGAT ATAATCATAC CAACTTATGT TATATATGCT CAAAACTTGA GTTTGTTCGG GAGTTTTTGT AGATGTAAAC ATGAGAGTTG AAATAAGGAA GAGGTTTTTT TTTTTTTGCA AGAGGAAATA GATAGAAGAG AGTGATCAAA ATCCTCTGGT TTGTGTTTTT GTTTTTTTGT TACTTCATAA GAAAGGTAAA CTCAAATATC AAAGATTTTG TTTTTTTACT T 
Length1391
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1497148.. 1498894
Download Sequence
A.thaliana
AGI-codeAT4G37180.2
DescriptionHomeodomain-like superfamily protein
TAIR curator summarymyb family transcription factor, contains Pfam domain, PF00249: Myb-like DNA-binding domain l; also isolated as a putative cytoskeletal protein in a yeast screen
Alias
Gene coexpression
MR
MR Locus Description
27.8209 Ahg481665 Protein of unknown function, DUF584
38.7814 Ahg326972 peroxidase CB
40.1373 Ahg477666 NAC domain containing protein 47
42.8486 Ahg483012 delta1-pyrroline-5-carboxylate synthase 1
45.2327 Ahg476162 Protein of unknown function (DUF1645)
51.0882 Ahg496217 Protein of unknown function, DUF584
75.2994 Ahg496059 lipid transfer protein 3
75.8354 Ahg950674 lipid transfer protein 4
81.2404 Ahg491183 arginine decarboxylase 2
83.0662 Ahg952470 delta1-pyrroline-5-carboxylate synthase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression