| Annotation |
|---|
| Description | jgi|Araly1|491231|fgenesh2_kg.7__664__AT4G34350.1 |
| Sequence |
CGTCTTGCTT GCTTGTGCGT TTCTCTCGAA CTCTCTCCAT GGCTGTTGCG CTCCAGTTCT ACCGATTATG CGTTCGGCCA GATACTTTCG TGCTGGAGAA TCATCTCTCT GGATCCGGAT CTCTCCGGCG CCGGAAAGCT TTATCAGTCC GATGCTCGTC TGGAGATGAG AACGCTCCTT CGCCATCGAT GGTGATGGAC TCCGATTTTG ATGCGAAGGT GTTCCGTAAG AACTTGACGA GAAGCGAGAA TTACAATCGT AAAGGGTTCG GTCACAAGGA GGAGACACTC AAGCTCATGA ATCGAGAGTA CACCAGTGAT ATATTGGAGA CACTGAAAAC AAATGGGTAT ACGTATTCTT GGGGAGATGT TACTGTGAAA CTCGCTAAAG CATATGGCTT TTGCTGGGGT GTTGAGCGTG CTGTTCAGAT TGCATATGAA GCAAGAAAGC AGTTTCCAGA GGAGAGGCTT TGGATTACTA ACGAAATTAT TCATAACCCG ACCGTCAATA AGAGGTTGGA AGATATGGAT GTTAAAATTA TTCCGGTTGA GGATTCAAAG AAGCAGTTTG ATGTAGTAGA GAGAGATGAT GTGGTTATCC TTCCTGCATT TGGAGCTGGG GTTGATGAGA TGTATGTTCT TAATGATAAA AAGGTGCAAA TTGTCGACAC GACTTGTCCT TGGGTGACAA AGGTCTGGAA CACGGTTGAG AAGCACAAGA AGGGCGAATA CACATCAGTA ATTCATGGTA AATATAATCA CGAAGAGACG ATTGCAACTG CGTCTTTTGC AGGAAAGTAC ATCATTGTAA AGAACATGAA AGAGGCGAAT TACGTTTGTG ATTACATTCT CGGTGGCCAA TATGATGGAT CTAGCTCTAC AAAAGAGGAG TTCATGGAGA AATTCAAATA CGCAGTTTCG AAAGGTTTTG ATCCTGACCA TGACCTTGTC AAAGTTGGTA TTGCAAACCA AACAACGATG CTTAAGGGAG AAACAGAGGA GATAGGAAAA TTACTCGAGC GAACAATGAT GCGCAAGTAT GGAGTGGAAA ATGTAAGCGG ACATTTCATC AGCTTCAACA CGATATGCGA CGCGACTCAA GAGCGACAAG ACGCAATCTA TGAACTAGTG GAAGAGAAGA TTGACCTCAT GCTAGTGGTC GGCGGGTGGA ATTCAAGTAA CACCTCTCAC CTTCAGGAAA TCGCAGAGGC ACGGGGAATC CCATCATACT GGATTGACAG TGAGAAACGG ATAGGACCTG GGAACAAAAT AGCATCTAAG CTCCATTATG GAGAGCTGGT CGAGAAGGAA AATTTTCTCC CGAAGGGACC GATAACCATC GGTGTGACAT CAGGTGCATC AACCCCAGAT AAGGTCGTGG AAGATGCTTT GGTGAAGGTG TTCGACATTA AACGTGAAGA GTTGTTGCAG CTGGCTTGAT TCGGCCTTGT GATCGTATTC AAATATATTG TTTGTTATTA TGTCAAGAGT GTACTAAAAT ATACTTAGTT GTATGATTGT CTTTATAACT TTTGTAATTC AAAGTCAACA TCCTTGTTCA TCTTACTCCA CTTAATGTTC TTACCATAAT CGTAATTAGA TTGATACAGA ACTTAAGACT GTGTAAGGCT GTC |
| Length | 1633 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 2645440.. 2648033 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G34350.1 |
| Description | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
| TAIR curator summary | Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling. |
| Alias | [CLB6][HDR][ISPH][CHLOROPLAST BIOGENESIS 6][4-hydroxy-3-methylbut-2-enyl diphosphate reductase] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.2915 |
Ahg490165 | Octicosapeptide/Phox/Bem1p family protein |
| 7.74597 |
Ahg327070 | cryptochrome 1 |
| 8.83176 |
Ahg923431 | CLP protease proteolytic subunit 1 |
| 12.1244 |
Ahg494796 | Insulinase (Peptidase family M16) family protein |
| 13.0767 |
Ahg927565 | sulfite oxidase |
| 14.5602 |
Ahg472589 | glutamate:glyoxylate aminotransferase |
| 16.2481 |
Ahg483917 | CP12 domain-containing protein 1 |
| 22.8035 |
Ahg497139 | |
| 23.2379 |
Ahg486620 | cysteine synthase C1 |
| 28.2843 |
Ahg487166 | Thioredoxin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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