| Annotation |
|---|
| Description | jgi|Araly1|923431|scaffold_104712.1 |
| Sequence |
CGTTGGTAGC TAAATCGGAG ATGGCGACTT CTCTGGTCTC TCCTCTTACT TCACAGCTCA ACCATGAAGC TGTCTGTTCC AAGTCTGTGC TTCCCAAATC ACCGTTCATG TCTGGATCTA AGCTCTTTTC ATCGAACATG CCTTGCTCTA CTGTTCCTAG ACGTACAAGG ATATCACACT GCTTTGCTTC TGCTAAAGAT ATGAGCTTTG ACCATATCCC TAAACAATTT CGAGGAGACA ATCTCAAAGA CGGAGTGGTG CAGAACTTCA AGAATGTACC GCAATATTTT TACGGGCTGA ATCCAGCTCA AATGGATATG TTCATGACGG AGGATAGCCC TGTCCGTAGG CAAGCGGAAA AAGTTACAGA GGAAAGCATC TCGTCTAGAA GAAATTATTT GGACAATGGA GGAATATGGA GTATGTCCGG TATGAATGCA GCAGATGCTA GAAGATATAG CATGAGTGTC CAGATGTACA GAGGTGGAGG TGGCGGAGGA GGATCTGAAA GACCAAGAAC TGCTCCTCCA GATTTGCCTT CTTTGCTATT GGATGCTCGG ATATGCTACC TTGGAATGCC AATCGTACCT GCAGTTACTG AGTTACTCGT TGCTCAATTT ATGTGGCTAG ATTATGATAA CCCAACAAAG CCCATCTACC TATATATAAA TTCACCCGGG ACCCAGAATG AGAAGATGGA AACTGTTGGG TCAGAAACAG AGGCTTATGC CATAGCTGAT ACCATCTCTT ATTGCAAATC AGATGTATAC ACTATCAATT GTGGCATGGC TTTTGGTCAA GCAGCAATGC TTCTTTCTCT CGGGAAAAAA GGTTATCGTG CCGTACAACC ACATTCATCA ACAAAATTAT ATCTGCCAAA AGTAAACAGA TCGAGTGGAG CTGCCATAGA CATGTGGATA AAGGCCAAGG AACTTGATGC AAATACTGAG TACTACATCG AGCTGTTAGC GAAGGGAACA GGGAAATCCA AAGAGCAGAT CAACGAGGAC ATCAAGCGAC CTAAATATCT CCAAGCACAA GCAGCTATTG ACTATGGAAT TGCAGACAAG ATAGCGGACT CGCAGGATAG TTCCTTCGAG AAACGGGATT ATGATGGGAC TCTTGCCCAG AGAGCCATGA GACCTGGAGG AGGCAGCCCA ACAGCTCCAG CCGGACTAAG ATGATCAATT CCCATTAGAA AAAAGG |
| Length | 1206 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 24790758.. 24793328 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G49970.1 |
| Description | CLP protease proteolytic subunit 1 |
| TAIR curator summary | Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). |
| Alias | [CLPR1][NCLPP5][SVR2][CLP protease proteolytic subunit 1][NUCLEAR CLPP 5][SUPPRESSOR OF VARIEGATION 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.85565 |
Ahg940830 | elongation factor family protein |
| 8.83176 |
Ahg491231 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
| 9 |
Ahg924574 | Peptidase M1 family protein |
| 10 |
Ahg494803 | FtsH extracellular protease family |
| 10.198 |
Ahg934210 | Sucrose-6F-phosphate phosphohydrolase family protein |
| 10.4881 |
Ahg495156 | CLPC homologue 1 |
| 10.9545 |
Ahg938476 | triosephosphate isomerase |
| 12 |
Ahg915044 | isopropyl malate isomerase large subunit 1 |
| 13.5647 |
Ahg912019 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| 14.1774 |
Ahg475077 | Translation elongation factor EFG/EF2 protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|