Detail



ID : Ahg491900

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491900|fgenesh2_kg.7__1333__AT4G28630.1
Sequence
ATGATGAGGG GGTCTCGGTT TCTCCTCTCT CGCGCTTCTC TTTCTTATCG TCTTCGCTCT GATTTTCATC ATCACCACAA TTTCATCAAA CGTAGCTCAA GTCAAAGATC ACCAGCTATC AATGCATTCC TCTCCGATCC ATCTCCATCT CCATCTCTGG TCAACGCACG CGTCGTGTTC TTCTCCACTT CAACTTCAAC TCCAAATCAA GATCAGGATC AAACCACCAC TAAATCTCAT AAAAAAATCA ACACGACGTC GTCTCAAAAG ATCCTCCGCA CGATTTCAAG CTATCTATGG ATGAAAGACA ACCCAGAACT CCGATTCAGA GTCATCGCTG CTTTAGCGTG TCTATTAGGA GCTAAGTTCT TGAATGTTCA ATTTCCTTTC CTCTTCAAAG TAGCTATCGA TTTACTCTCT TCATCTTCAT CAACAATCGC TGATTCAAAT CTTTATCTTC TTGCTGCTTT CGCTACTCCT TCTTCTGTTC TCATTGGTTA TGGCATTGCT CGATCTGGAT CTTCTGCTTT TAACGAGCTT CGTAGTGCTG TTTTCTCTAA AGTAGCTCTC CGCACAATAC GATCCGTTTC TCGTAAAGTG CTCTCGCATT TACACGATCT TGATCTTCGT TACCATTTGA ATCGAGAAAC AGGAGCTTTG AATAGAATCA TTGATCGTGG AAGCCGCGCT ATTAACACGA TCCTCTCAGC TATGGTTTTC AATGTTGTTC CAACGATCTT GGAGATATCT ATGGTCACAG GTATATTAGC ATACAATTTT GGACCTGTTT TTGCTTTGAT CACTTCTCTT TCCGTTGGAT CATACATTGC TTTCACATTG GTTGTGACAC AATGGAGAAC TAAGTTTAGA TTAGCTATGA ATAAAGCTGA TAATGATGCT AGCACAAGAG CTATTGATTC TCTTATAAAC TACGAGACTG TTAAGTATTT CAATAACGAA GATTACGAAG GGAGAAAGTA CGATGATTTA CTCGAAAGAT ATGAAGATGC TGCATTGCGA ACTCAGAAAA GTCTTGCCTT TTTAGATTTT GGACAGAGTT TTATATTTAG TACAGCTTTG TCAACATCAA TGGTGTTGTG TTCTCAAGGG ATTATGAATG GAGAGATGAC AGTTGGTGAT TTGGTGATGG TGAATGGTCT TCTCTTTCAA TTGTCTCTTC CTCTTTACTT TCTTGGTGGT GTTTACCGCG AAACCGTTCA GAGCCTTATG GATATGAAAT CAATGTTCCA GTTGCTAGAG GAGAGATCCG ATATCGGAGA TAAAGATACA AATACAAAGC TTCCTCTTCT TGTTCTGAAA GGTGGAAGTA TTAGTTTTGA GAATGTACAC TTTAGTTATC TACCGGAGAG GAAGATTTTA GATGGGATTT CATTTGAGGT ACCGGCGGGG AAAAGTGTGG CGATTGTTGG TAGTAGCGGA AGCGGAAAAT CGACGATTCT TAGAATGATA TTTAGATTCT TTGACACAGA TTCCGGAAAT GTAAAGATTG ATGGTCAGGA TATAAAGGAA GTGAGATTAG AGAGTCTTCG AAGCTCCATT GGAGTTGTCC CTCAAGATAC TGTGCTCTTC AATGACACAA TATTTCACAA CATTCACTAT GGAAATCTTT CAGCAACAGA GGAAGAGGTG TACGAAGCAG CTCGGCGAGC AGCGATTCAC GATACGATCA TGAAATTCCC GGATAAATAT AGGACCGCGG TGGGAGAAAG AGGGTTGATG CTGAGTGGTG GAGAGAAACA AAGAGTGGCA CTGGCTCGTG CCTTTCTGAA ATCACCTGCA ATCCTGTTGT GTGACGAAGC AACGAGTGCG CTTGACAGTA AAACAGAGGC AGAGATAATG AAAACGCTCA GATCGTTAGC GAGTAACAGA ACTTGCGTCT TCATTGCACA TAGGCTGACC ACTGCGATGC AATGTGATGA AATAATAGTA ATGGAGAAAG GGAAAGTAGT GGAAAAAGGG ACACACCAAG TGTTGTTGGG GAAATCTGGG AGATACGCCA ATTTGTGGAC ACAACAAAAC AGTAAATTGG AGGTGTGAAA AGAGCAAGTG TTGGGGTTCT GTTTTCGCCT AATTAATTCT TTTTTTT 
Length2107
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5313120.. 5315580
Download Sequence
A.thaliana
AGI-codeAT4G28630.1
DescriptionABC transporter of the mitochondrion 1
TAIR curator summaryHalf-molecule ABC transporter ATM1. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth.
Alias[ABCB23][ATATM1][ATM1][ATP-binding cassette B23][ABC transporter of the mitochondrion 1]
Gene coexpression
MR
MR Locus Description
11.9164 Ahg491901 ABC transporter of the mitochondrion 2
43.8634 Ahg478135 Calcium-dependent ARF-type GTPase activating protein family
45.6618 Ahg483915 Cytochrome c oxidase subunit Vc family protein
59.1439 Ahg484485 actin related protein 2
63.7652 Ahg485410 KIP-related protein 2
65.9394 Ahg312135
66.053 Ahg315326 Nodulin MtN21 /EamA-like transporter family protein
68.0808 Ahg472556
68.2788 Ahg936615
81.1419 Ahg312743 SU(VAR)3-9 homolog 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression