Detail



ID : Ahg492265

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492265|fgenesh2_kg.7__1698__AT4G25620.1
Sequence
AATAATATTT TCATGGAAGC GCGTGGGTCC GAACCGTCAA TTTAAGATGA CGTGGCAAAA TCTCGTGGGA AATTGAATGA AAACTGTAAA AGATAACGAC CGGTGAGAGA GAGAAGCGGC TCATCCATAA TAAAAAGCCT TTTGCTCCAT ATTCATAGTA TTTATTCTCT CATTCTTTTC TTTTCGGATT TTGTTTGTGT TTTGATTTTA CCGCCTTGTT ATTGCTATGA GATCAAGAGG TGGTGAAACA AAAGTTGAAA ATCTGGATGT TATTTGATTG TCGTCGTTGG TCTTGAGATA TGAGGAGCGT CGACACGGTG AACGCCGCCG CTTCCGCCAT CGTCTCCGCC GAGTCTAGAA CACAACCGTC GTCGGTTCAT AAAAAATGGG GAAGCTGGTG GAGCTTGTAC TTGTGTTTTG GATCCAAGAA GAACAATAAG CGGATTGGCC ACGCGGTGCT TGTACCCGAA CAAGCTGCAT CCGGAGCTGC GGTGGCTCCA GTCCAAAACT CTTCTAGCAA TTCAACTTCA ATGTTCATGC CCTTTATAGC TCCTCCTTCA TCTCCTGCTT CGTTTCTGCC ATCAGGTCCT CCATCTGTGT CACATACTCC TGGTCCTGGT CTACTTTGTT CCCTAACCGT CAATGAACCG CCTTCAGCCT TTACTATTGG ACCTTACGCT CATGAAACTC AACCTGTTAC TCCTCCAGTG TTCTCTGCTT TCACAACGGA ACCATCCACC GCGCCATTCA CTCCACCTCC TGAATCACCT TCTTCGCCTG AAGTGCCTTT TGCTCAGTTA CTTACATCTT CACTGGAAAA GGCTAGGAGG AACATCGGTG GCGGAATGAA TCAGAAGTTT TCAGCTGCAC ACTACGAGTT TAAGTCTCAT CAAGTGTATC CTGGAAGTCC AGGTGGTAAT CTAATCTCCC CTGGTTCAGG TACATCTTCT CCTTACCCAG GGAAATGCTC CATCATTGAG TTTCGTATCG GTGAACCTCC AAAGTTTTTG GGGTTTGAGC ACTTCACAGC GCGTAAATGG GGATCAAGAT TCGGTTCTGG ATCCATCACA CCTGCTGGTC AAGGTTCAAG GTTGGGTTCA GGTGCTCTGA CTCCTGATGG TCTCACACCA CTTGAAGGCA GTCTTTTGGA TAGTCAGATC ACTGAGGTTG CGTCTTTAGC CAATTCGGAC CACGGGTCAT CAAGGCATAA TGATGAAGCT GCCGTGGTTC CTCACAGAGT TTCTTTTGAG TTGACAGGTG AAGACGTAGC ACGTTGTCTT GCAAGCAAGC TAAACCGATC CGGTTCGCAT GAAAGAGCGA GCGGCGAACA CTTAAGACCA AACGGTTGTA AAACATCGGG AGAAACAGAG AGCGAACAGA GTCAGAAGCT AAGATCGTTT TCTACAGGCT CTAGCAAAGA ATTCAAATTT GATAACACGA ATGAAGAGAT GATAGAGAAA GTTAGATCGG AGTGGTGGGC GAATGAGAAG GTCGCCGGAA AAGGTGATCA CAGTCCAAGA AACAGTTGGA CTTTCTTTCC GGTCTTACGC TCTGGATCCA CTTGACAAAA AAAAAAGCCT TTTATCTTCT TCATTACCTC TAACATGGGA AGCAAATTCA GTGTATGGTA AGATATTGGG GTCTAACAAC TATACATATA TAGCTTTGCA TTGTAGGTGT CTTTGTTCTT TGTACTGATA GTTATATAAA ATAGTTTAAA CACATAATGG TAGACTTATC ATTGACAAAA 
Length1750
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6563776.. 6566182
Download Sequence
A.thaliana
AGI-codeAT4G25620.1
Descriptionhydroxyproline-rich glycoprotein family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.5448 Ahg489075 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
24.3311 Ahg484057 Auxin efflux carrier family protein
28.2843 Ahg919773 Protein of unknown function (DUF1005)
31.8434 Ahg947918 homeobox protein 34
36.4966 Ahg483352 tetratricopetide-repeat thioredoxin-like 3
42.9884 Ahg494472 SBP (S-ribonuclease binding protein) family protein
47.7179 Ahg907564
52.0481 Ahg486898 conserved peptide upstream open reading frame 48
52.7636 Ahg949608 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
55.0818 Ahg929929
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression