Detail



ID : Ahg890839

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890839|Al_scaffold_0007_2825
Sequence
ATGGCGTATT CTGTTCTTCG GCTTCGAAAG GTTTCAGCTT TGGGGATTTC TCGTGTTCTT CAAGCTGATC AGGGAAGTTT GTGGCGGTTT TACTCCGAAC CTGAGTTTGG TGAGTTTTTG AGATTAGGTG TCTTGACTAG GAACTACAGA AAGAACTCAG GATCTCCAAA GTTTGATTTC ACTGGCACGG GAACTACCTC AAAGTTCGAT TTCACTGATC TCACCTGTCC TCATACATGG TATCCAATAG CTCGGAAGAA GAAGCGTAAG GTTATTCTAC ATGTTGGCCC GACAAACAGT GGGAAGACAT ATAGTGCTCT TAAGCACCTT GAGCAGAGTT CTTCAGGCGT ATATTGTGGT CCGTTAAGAT TGTTGGCATG GGAGGTAGCT AAACGGTTAA ACAAAGCAAA TGTTCCATGT GATTTGATCA CGGGACAAGA GAAAGACTTA GTGGAAGGGG CAACACACAA AGCTGTGACA GTTGAAATGG CTGATGTTAC GTCGGTCTAT GATTGTGCCA TCATTGACGA AATTCAGATG GTGGGATGTA CACAAAGGGG ATTTGCATTT ACTCGTGCTC TACTTGGAAT CGCGGCTGAT GAGCTACATC TATGTGGCGA TCCTGCTGTC GTACCTCTTG TTGAAGATAT ACTGAAAGTA ACTGGAGATG ATGTCGAGGT TCGAACATAT GAGAGGCTTT CACCATTAGT CCCTTTGAAG GTGCCTGTTT CATCAGTTTC CAGTATCAAA ACTGGGGATT GTCTTGTCAC CTTTTCCCGA AAAGATATAT ATGCATATAA GAAAATAATT GAACGTGCGG GGAATCATCT TTGCTCTGTG GTTTATGGTT CATTGCCTCC AGAGACTCGG ACAGCACAGG CAACAAGGTT TAATGACGAG ACCAATGACT TTGATGTGCT TGTTGCCAGC GATGCAATTG GCATGGGTCT TAATTTGAAT ATTTCAAGGA TTATCTTCTC GACCCTTCAA AAATTTGATG GTTCCGAGAC CAGAGACCTA ACAGTATCTG AGATTAAACA AATTGCAGGG AGAGCTGGCA GATTCCGATC AAAGTTCCCT ATTGGCGAAG TAACTTGTTT GCACAAAGAG GATCTTCCGT TGCTCCACTC TTCTCTCAAG TCTCCTTCAC CTCTTCTTGA GCGTGCTGGA CTATTTCCAA CATTTGACCT CCTTTCTAGG TATTCCCAAG CACACCCTAA ACACGGGTTG TACCAGATAT TGGAACATTT TGTTGAAAAT GCTAAGCTGT CTTCAAACTA TTTCATCTCA AATGTTGAAG ACATGATGAA AGTTGCTGCC ATTGTTGATG AATTACCCCT CGGATTGCAA GAGAAGTACC TCTTCGTAGT CAGTCCAGTT GATATAAATG ACGAAATTTC AGGTCAGGGA CTTGCACAGT TTGCTCACAA CTTCTCGAAG GCAGGCGTTG TGAGGCTCCG GGAGATACTT GCAGCCGACA GAGTTAAGGT TCCCAAAACA CCAACAGAAC TAAAGGAACT TGAATCCATT CACAAGGTTT TGGATCTGTA CGTATGGTTA AGCTTAAGGC TAGAGGATTC TTTTCCTGAC CGCGAAGTAG CAGCTTCGCA AAAGTCAATC TGCAATATAT TGATTGAGCA ATTCTTGGAG GGAAATAGAT TAAACTCTCC TACCCGCGTC TCACGATATC TAAGAAAGCA AAAATTCTGA 
Length1710
Protein Sequence
Protein Residue
Map Locationscaffold_7: 12679374.. 12682914
Download Sequence
A.thaliana
AGI-codeAT4G14790.1
DescriptionATP-dependent RNA helicase, mitochondrial (SUV3)
TAIR curator summaryencodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.
Alias[ATSUV3][EDA15][embryo sac development arrest 15]
Gene coexpression
MR
MR Locus Description
2 Ahg918924 importin alpha isoform 6
6.7082 Ahg495187 alpha/beta-Hydrolases superfamily protein
13.3417 Ahg923204 DEA(D/H)-box RNA helicase family protein
13.8564 Ahg478935 RAB GTPase homolog A1G
14.1421 Ahg488073 dgd1 suppressor 1
15.3623 Ahg494049 solanesyl diphosphate synthase 2
21.166 Ahg916789
29.1033 Ahg490110 calcium-dependent protein kinase 21
30.3974 Ahg491167 P-loop containing nucleoside triphosphate hydrolases superfamily protein
31.305 Ahg919498 NOT2 / NOT3 / NOT5 family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression