| Annotation |
|---|
| Description | jgi|Araly1|892659|Al_scaffold_0006_655 |
| Sequence |
ATGCCGTCTG ATATATTGGA ACCCAGAGGT CTGCCTACAC CTTCTCATTT TCATGAAGAC ATTCGCATCA CTCCTGAGAA ACAATTTGGT TTCATGAAAA ACAATCCAAT GCCTGAAGGT GGTGGGGATA GATGTTCAAC TCTACCGACT AGTTCTTGGA CATCTGACAG TTACCAGCTC TCGCAACAAT CAAGCTTGTC TGGGGCGCTT CCCTCCTTTA TCCCTAATGG AAGAAATGAT ACTCACTGGG AGAGCAGTCT ATTTTCCAGC TCCCTGTCTG ACCTATTTAG TAGAAAATTA CGGCTACCAC GGAGTGATAA GTTAGCCTTT ATGTCTGCAA ACCGTGAGGA AGAACCTTTC GAGTCCTTAG AAGAAATGGA GGCGCAAACT ATTGGAAATC TTCTTCCAGA TGAGGATGAT CTTTTTGCAG AAGTGGTTGG TGAGGGTGTC CACAAGTCTC GTGCCAATGT TGGAGATGAT TTGGATGATT GTGACCTATT CAGCAGTGTT GGTGGCATGG AACTAGATGG AGATGTATTC TCGTCTGTCG TTCAAAGAGA TAGCAAGAGA GGCAGCAATG TTTCGATTGT TGGTGAGCAT CCTCATGGAG AAACTTTATC CAGAATACTT TTTGTTAGGA ATGTGGATAG CATCATTGAA GATTGCGAGC TGAGGGTCCT TTTTAAGCAA TATGGAGATA TCCGGGCTCT TCATACAGCT GGGAAGATTC GTGGCTTTAT CATGGTATCA TACCATGATA TAAGATCTGC TCAGAATGCG GCGAGAGCAC TCCACGGTAG GCTCTTAAGG GGAAGGAAGC TTGATATTCG TTATTCTATC CCAAAGGAAA ATCCTAAAGA GAACTCCAGC GAAGGAGCAT TGTGGGTAAA TAATCTTGAT TCTTCTATAT CCAATGAAGA GCTTCACAGA ATATTCAGTT CATGTGGAGA AATTAGAGAG GTTCGTAGAA CAATGCATGA GAACTCACAA GTTTACATAG AGTTCTTTGA TGTTCGAAAG GCAGAGGTTG CACTTCAAGG ACTAAATGGA CTTGAGGTCG CTGGGAGGCA GCTTAAACTT GCACCAACCT GTCCAGAGGG TACAAGTTTC TCGCCACAGT TCACTGCAGA TGATGGTGAG GGGGGTCTAC CTAATATAGC TTTTAATAAC CTATCATCAG CACATATGGG GAGACATTTC CCAGGAATAT TAGCTTCGAC CTCCATTGAT GGTGGATCTA TTCGAGCTGT GCACAATTCT GTTGGGTCAC CTGTGAACTC CTTCATTGAG CGTCATCAGA GTCTCAATGT TCCTATTGGT TTGCCACCAT CGGCAAGAGT CATCTCAGCT AGCAAGCCTG TTGGTCTTCA GGAGTTTGGA AACCCATTTG ATAATTCGAA AACGGGGATC CAAAGTATGC CAAATCTCCA TCCTCATTTT CCTGAGTACC TTGACAACTT TGCAAGCGGT AGTCCATATA AATCCTCTAG TACATTCTCT GAAATGGTAA GCGATGGCCA AAAAGCAAAT GTTCGTGGAG TGGGCGTAGA TGGGTTTAAT GGAGGTGTCA TAGGATCTCC CATAAATCAA GGATCCCATC GCGGTAATCT CAACTTATGG AGTAACGCTA ACACTCAGCA ACATAATCAG TCAAGTGGCA TGATGTGGCC TAACTCACCA TCTCGCGTCA ACGGCATTCC TTCTCAACGC ATCCCGCCTG TTACTGCATT CTCTAGAGCA TCTCCTCGGA TGGTGAACAT GGCATCATCG CCTGTGCACC ACCACATTGG ATCTGCCCCG GTATTAAACT CACCTTTTTG GGATAGAAGA CAGGCATATG TAGCTGAATC TCCAGAATCT TCAGGATTTC ACTTAGGTTC TCACGGTAGC ATGGGATTTC CAGGCTCGTC TCCCTCACAT CCAATGGAAA TCGGTTCTCA TAAGGTTTTT TCTCATGTTG GTGGGAATCG CATGGATACC AATTCAAAAA ATGCTGTATT ACGATCATCG CGACAGATGC CTCACCTCTT TACTGGAAGG AGCCCAATGC TTTCAGTGTC AGGCTCATTT GACTTACCTA ATGAACGATA CAGGAATCTC TCTCACCGAA GAAGTGAATC TAGCTCTAGT AATGCTGAAA AGAAACTGTA TGAGCTTGAT GTTGATCGCA TATTACGTGG GGACGACAGT AGAACAACAT TGATGATAAA GAACATTCCT AACAAGTATA CTTCTAAGAT GCTTCTAGCT GCTATTGATG AGTACTGTAA AGGAACATAT GATTTCCTTT ATTTGCCAAT TGACTTCAAG AATAAATGCA ATGTGGGATA TGCTTTCATC AACCTTACCG AACCTGAAAA TATTGTTCCC TTTTATAAGG CATTCAACGG TAAGAAATGG GAAAAGTTCA ACAGCGAGAA GGTGGCATCT CTTGCATATG GTCGGATTCA GGGAAAATCA GCTCTTATTG CCCATTTCCA GAACTCAAGT TTGATGAACG AAGACAAACG TTGCAGGCCT ATTCTCTTCC ACACTGCTGG TCCAAATGCT GGTGATCAGG AACCATTTCC AATGGGTTCC CACATCCGGT CAAGACCAGG CAAGCCTCGA ACAAGTAGCA TCGAGAACTA CACCAACTTT AGCAGTAGCT CTGAAAACCG AGAAGAACCT GGAAATGGGA ACGACTCGAT GTAA |
| Length | 2694 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2705971.. 2710278 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G07290.1 |
| Description | MEI2-like 4 |
| TAIR curator summary | AML4 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML4 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM14. AML4 is expressed during embryo development (heart and torpedo stage) and in vegetative and floral apices. |
| Alias | [AML4][ML4][MEI2-like 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg489028 | 5'-AMP-activated protein kinase beta-2 subunit protein |
| 3.4641 |
Ahg495004 | PAS domain-containing protein tyrosine kinase family protein |
| 4.58258 |
Ahg482899 | Guanylate-binding family protein |
| 8.66025 |
Ahg908375 | UDP-Glycosyltransferase / trehalose-phosphatase family protein |
| 11.5326 |
Ahg949937 | NADH-dependent glutamate synthase 1 |
| 13.0767 |
Ahg942029 | Protein of unknown function (DUF1162) |
| 13.6382 |
Ahg482131 | CVP2 like 1 |
| 15 |
Ahg479115 | UDP-glucosyl transferase 88A1 |
| 15.1658 |
Ahg941394 | beta-amylase 3 |
| 20.8567 |
Ahg496533 | nuclear factor Y, subunit C4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|