Detail



ID : Ahg496006

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496006|fgenesh2_kg.8__1822__AT5G58787.1
Sequence
GAGAGGTTTA TCGAGAAAAA TCCAAAGTTT ACTAAAAAAC TGTCTTCATT AATGTAATTT TGATCATCGG ATTGGGTGAA ACATCTAAAA TTCTGCTAAA AGAGAAGCCT TTAAAATTTT CCTTTTTTTC TTTAAACAAA ACAAAAGAAG AAAATTTACT TTTTGTTTTG GATGCTATGA ATCTTCGTTT TGCTTTCTTG ATTCTCTGTT TCGTTTGATG GGAACTATTT TCTGGGAAAT TAATTCATTC ACCTGCCATG GCTAAATTAT CTTTCAAGGA TTCGCTGAAA GCTCTTGAAG CCGATATTCA ACACGCTAAT ACACTAGCTT TAGATTGTCC TCGGGAGAAG GATGGAGCGC GCGTTCAGAT GAGATTATCG TACAGCCCGG CTGCTCAATT TTTTCTTTTT CTTGTACAAT GGACTAATTG TCAGCTTGCT GGTACCCTCG GTTTACTCAG AGTTCTTATT TATATGACTT ATGCAGATGG AAAGACCACG ATGTCGGTTT ACGAAAGAAA AGCCAGTATC AGAGAGTTCT ACGCTGTGAT ATTACCGTCT TTGTCACAAC TAAGGGGTAT TACAGACGTA GATGACCGCA GACAAAAAGA GGTATGCAAG ATGCGATACA GAAAGAAGGA TGAGAGCGAG AAGTGCGAGC TCTCGGAGAT TGAGATAGAG AGGGAAGAAG AATGTGGAAT CTGTATGGAA ATGAACAGCA TGGTGGTGCT ACCAAACTGT ACTCATTCTT TATGCATCAA GTGTTATCGC GATTGGCGAG GGAGATCACA GTCATGCCCC TTCTGCAGAG ACAGCCTTAA AAGAGTAGAC TCGGGTGATC TCTGGATGTT TTTGGACCAA AACGATACAG TGAATCTTGC TGCAATCGCG AGAGAGAACC AGAAAAGGTT GTTTACGTAC ATTGAGAAGT TGCCACTGGT GGTTCCAGAT CAAGCGTATG CGTCTTCTCC TTACGATTGC CATGTGAGGT GAAGGCGGAA AAACCGGTTC TGGTAAATTT TTATCTGTAT ACTTGGGGGA AAAGAGGACT CCTTTTGTAT ATGTATTAGA GTTAGTACAA GTAGTAGTAA TCAGTCTCTT TCTTTTATCT TGGGAAAGTT CCACTTACTA CGTGCTTTTT CTGCATTTTG CTATCTCGTA AGCTTCAAGA AGCTCATATA 
Length1180
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17606185.. 17608285
Download Sequence
A.thaliana
AGI-codeAT5G58787.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.1555 Ahg352314 Copper amine oxidase family protein
17.2047 Ahg943129 Copper amine oxidase family protein
22.4054 Ahg482040 Plant protein of unknown function (DUF828)
29.189 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
32.311 Ahg484750 Methylenetetrahydrofolate reductase family protein
32.5576 Ahg927919
32.8938 Ahg923189 Outer arm dynein light chain 1 protein
36.1939 Ahg495081 Transducin/WD40 repeat-like superfamily protein
36.6606 Ahg952033 Cyclase family protein
37.9473 Ahg938658 A20/AN1-like zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression