Detail



ID : Ahg496704

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496704|fgenesh2_kg.8__2520__AT5G64840.1
Sequence
GAGAGAAACT CTTATCAAAG CTTTTCTGCT TCTTCTTCTT CTTCTTCGGT AGAGGAAGAT TCTCTCGCGA GAGATTGCTC AACTTCTCTC CATGGGCTTA TCAACAAATC TCCATAGCCT CGACCTCCGT TCAACATTCT TCACCGGTCT CCGTCCTTGT CCATCTCCAA TCCCTTCCAA TTTCATCAAA ATCTCTTCCA TTTCCAACCC TAGACGCGGA ATCTCCACCA TCAGAGCCCA AGTTTCCACC ATCAGCCTCG AGACCTCCGT TAAAGAGCGT CAAGACGAAA TCGAATCGCT TTTCTCGAAA CCAACCTCCG AACAAGACTC CGACCGGAGA CGAAACGGGA AGAATTCCAA AAACGGAGCT TCTGGGATTT CGTCAGGTGT GAAGCTAGAG AACATAAGGA AGAGCTACAA AGGCGTGACT GTGCTTAAAG ATGTGACCTG GGAAGTGAAA AGGGGTGAGA AAGTAGGGTT AGTGGGAGTG AACGGAGCTG GGAAGACGAC TCAGCTCAGG ATTATCACTG GTCAAGAAGA GCCTGATTCA GGTAACGTAA TCAAGGCCAA ACCCAATATG AAAATAGCTT TCTTGAGCCA GGAATTTGAG GTTTCGATGA GTAAGACGGT GAGGGAAGAG TTCATGAGTG CTTTTAAGGA AGAGATGGAG ATCACTGAGA AGCTTGAGAA AGTTCAGAAG GCTATTGAAG GATCTGTTGA TGATTTGGAT CTTATGGGAA GGTTATTAGA TGAATTTGAT TTGTTGCAGA GACGAGCTCA GGCTGTGAAT TTGGATTCCG TTGATGCTAA GATTAGTAAG TTGATGCCGG AATTAGGTTT TGCCTCAGAG GATGCTGATA GGCTTGTGGC TTCCTTTAGT GGTGGATGGC AAATGAGAAT GTCACTTGGA AAGATTTTGC TTCAGGATCC AGATTTGCTG CTTCTTGATG AGCCGACCAA CCATTTGGAT CTTGATACTA TTGAGTGGCT TGAAGGTTAT TTGCAGAAGC AAGATGTGCC TATGGTTATT ATTTCACATG ACAGAGCCTT TCTTGATCAG TTATGTACTA AAATTGTGGA AACTGAGATG GGTGTGTCCA GGACATTTGA GGGTAATTAT TCTCAGTATG TGATCTCAAA GGCAGAGTGG ATCGAAACTC AGAATGCAGC TTGGGAAAAG CAACAGAAAG AGATCGATTC AACTAAGGAC TTGATCGCTA GGCTTGGTGC TGGTGCCAAT TCTGGTCGTG CTTCTACTGC AGAAAAGAAA CTAGAGAAGC TTCAAGAACA GGAGCTAATA GAAAAGCCAT TTCAGCGGAA ACAGATGAAG ATAAGGTTTC CAGAGCGTGG AACAAGTGGA AGATCGGTAG TCAATGTTAA AAACATTGAT TTTGGTTTCG AGGATAAGAT GCTATTTAAG AAGGCTAATC TATCAATAGA AAGAGGGGAG AAAATCGCCA TTATTGGCCC GAACGGTTGC GGAAAGAGTA CGTTATTGAA GTTAATTATG GGTTTAGAAA AGCCTATGAA AGGTGAAGTT ATTCTTGGAG AGCACAATGT ACTGCCAAAC TACTTTGAAC AGAATCAGGC CGAGGTCCTT GATTTGGATA AAACAGTGCT TGAAACAGTT TGTGAAGCTG CAGAAGACTG GAGAAGTGAT GATATAAAAG GTCTTCTTGG ACGCTGCAAC TTCAAAGCAG ACATGCTTGA TCGAAAGGTC TCTCTTTTAA GCGGTGGTGA GAAAGCGCGT CTTGCTTTCT GCAAATTCAT GGTGACGCCA TCAACTTTTC TCGTTCTGGA CGAACCAACT AATCACTTAG ACATTCCTTC AAAAGAAATG CTTGAGGAAG CGATAAACGA GTACCAAGGT ACAGTCATCG CGGTATCCCA CGATCGATAC TTTATCAAAC AAATCGTTAA CAGAGTGATA GAAGTAGAGG ATGGTTGTTT AGAAGATTAT GCAGGCGACT ACAATTATTA CTTGGAGAAG AATCTGGATG CTAGGGCAAA AGAGCTGGAG AGAGAAGCAG AGCTAGAAGA GAAAGCTCCA AAAGTGAAGG CAAAGTCAAA GATGTCAAAA GCTGAGAAAG AAGCGAGGAA GAAGCAGAAG ATGCAAGCGT TTCAACAAGC TAAACAGAAA TCAAAGGCTA GCAAGAACTC CAAGAGATGG AACTGAACAA ACACGGAAAA CTGAAAGGAG TCAAGATTTA CAAAAAATGT GGAATGTATA TAGATATACT TTTAGAAATG CAGAGAGAGT ATTAATGTTT CTACAACACT TGAGCCCCAT TGGGTTAAAT TAAGAAACTT TATTGTCTCA AAAATGGATG AATCGAATCG AACCATTGAA TTTCAGTGCA AAACCTA 
Length2367
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20367175.. 20370348
Download Sequence
A.thaliana
AGI-codeAT5G64840.1
Descriptiongeneral control non-repressible 5
TAIR curator summarymember of GCN subfamily
Alias[ABCF5][ATGCN5][GCN5][ATP-binding cassette F5][general control non-repressible 5]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg480385
2.44949 Ahg492115 mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase
2.82843 Ahg491144 catalase 2
2.82843 Ahg481465 glycine decarboxylase P-protein 2
5.2915 Ahg470724 Calcineurin-like metallo-phosphoesterase superfamily protein
6.16441 Ahg496863 Protein of unknown function (DUF1230)
6.40312 Ahg940842 Pentatricopeptide repeat (PPR-like) superfamily protein
6.63325 Ahg485715 plasma membrane intrinsic protein 2A
7.74597 Ahg489353 CONSTANS-like 4
8.12404 Ahg941228 PHYTOENE SYNTHASE
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression