Detail



ID : Ahg887655

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887655|Al_scaffold_0022_8
Sequence
ATGCTCGACT CTACCCCAGT GTTTGTGTTT ATTCTAGGTT TGCTTCTCCT TACATTAACT ATGAAGCGTA AGGAGACGAA CAAAACCATG ATATTCATTT GCCACACGAG AAACCTCTCT CTCCCTCCCG GGCCGAAATC TTGGCCTCTA ATAGGAAACC TGCCAGAAAT ACTAGGGAGG AACAAGCCGG TGTTCCGGTG GATACATTCT CTCATGAAAG AACTTAACAC CGATATTGCG TGTATCTGTC TTGCGAATAC TCACGTGATC TCCGTGACAT CCCCGAGAAT TGCAAGGGAG ATTTTGAAGA AGCAAGACTC CGTTTTTGCC ACTAGACCGC TAACAATAGG CACGGAGCAC TGCAGTCGCG GGTACTTGAC CATTGCGGTG GATCCACAAG GAGAGCAGTG GAAAAAGATG AGGAGAGTGG TGGCATCTCA CGTGACGAGC AAGAAGAGCT TCAAATTGAT GCTTGAAAAG AGAACCGAAG AGGCTGATAA CTTGGTCCGG TACATCAATA ACCGCAGTGT CAAAAACTGT GATAATGGTA ATGGTCTTTC GGTTATTGAT TTAAGGCTTG TGTTGCGGCA ATACAGCGGA AATGTAGCTC GGAAGATGAT GTTTGGTATA AGGCACTTTG GTAAAGGAAG TGAAGATGGA TCGGGACCAG GGTTCGAAGA GATTGAACAT GTTGAATCTT TGTTTACAGT TTTAACCCAT CTTTACGCCT TTGCATTGTC GGATTATGTC CCGTGGCTAA GGTTCTTGGA CTTGGAAGGC CAAGAGAAGA TTGTGATTGA CGCAATGAGA AATGTAAGCA AGTATAACGA TCCTATTGTC GATGAAAGAC TCATGCAATG GCGAAATGGA AATATGAAAA AGCCTCAAGA TTTTCTTGAC ATGTTTATAA TGGCGAAAGA CACTGACGGG AAACCTACTC TGTCGGACGA AGAGATCAAA GCACAAGTGA AGGAACTAAT GTTGGCGACG GTGGATAATC CGTCTAATGC GGCGGAATGG GCCATGGCGG AGATGATTAA TGAGCCGAGC ATCATGCAAA AAGCCGCTTG CGTGAAAGAG GCATTCCGGT TACATCCCGT GGCGCCGTTC AACCTCCCTC ACATGTCCAC TGCCTACGCT GTGGTAGACG GTTACTTCAT CCCCAAGGGA AGCCACATGC TAATTAGTCG TATGGGGATC GGGAGAAACC CTAGCGTGTG GGACAAGCCG CTTAAGTTCG ACCCTGAGAG ACATTTGGGC AATAACAAAA CCATGACGTA CATGTTGCTG GCTCGGTTGA TTCAAGGGTT CACGTGGTCA CCAGTGCCCG GTGAAAGTAA AATTGATCTT TCATTAAATG TAGTTTCGGA ATATTCAATT ATAATCTTCT AA 
Length1392
Protein Sequence
Protein Residue
Map Locationscaffold_22: 40869.. 43068
Download Sequence
A.thaliana
AGI-codeAT5G35917.1
Descriptioncytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene
TAIR curator summarya pseudogene with cytochrome P450 domain
Alias[CYP79A3P]["cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene"]
Gene coexpression
MR
MR Locus Description
1 Ahg325159 cytochrome p450 79a2
12.3693 Ahg492710 Subtilase family protein
16.9115 Ahg318716 Glycosyl hydrolase family protein
17.8326 Ahg493202 terpene synthase 03
19.2354 Ahg313253 cellulose synthase-like A10
24.8193 Ahg473234 Protein of unknown function (DUF295)
26.2679 Ahg907175 Glycosyl hydrolases family 32 protein
26.3249 Ahg354010 vacuolar iron transporter (VIT) family protein
27.3496 Ahg923946 pectin methylesterase 2
28.4253 Ahg317230 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression