Detail



ID : Ahg887864

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887864|Al_scaffold_0904_1
Sequence
AAATATAGGT CACATCGGAA ACATCTACTA GCGCGTGAAG CAGAAGCTGC CAGCTGGAAT CTCCGGCGAC ATGCGACGGT GGCAGTGGCC GGAGTAGGAG GAGGTGGGAA GAAGCCATGG ACGGCTCCTG CCTTAGGCTA TCCACCACAC GTGGCACCAA TGCATCATGG CCACTTCAGG CCTTTGCACG TGTGGGGTCA TCCTACGTGG CCTAAACACA AGCCTAATAC TCCTGCGTCT GCTCATCGGA CGTATCCGAT TCCGTTAGTT GCGGCGGCTC CGGCATCTTG GCCAGGTCAT CCGCCGTACT GGCACCAACA ACCACTATAT CCACAGGGAT ATGGTATCGC ATCATCGAAT CATTCAAGCA TCGGTGTTCC CACAAGACAA TTAGGAACCC ACTAA 
Length405
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3370985.. 3371790
Download Sequence
A.thaliana
AGI-codeAT5G44190.1
DescriptionGOLDEN2-like 2
TAIR curator summaryEncodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.
Alias[ATGLK2][GLK2][GPRI2][GOLDEN2-like 2][GBF'S PRO-RICH REGION-INTERACTING FACTOR 2]
Gene coexpression
MR
MR Locus Description
30.9677 Ahg900167 3-ketoacyl-CoA synthase 10
41.1339 Ahg924442 Polyketide cyclase/dehydrase and lipid transport superfamily protein
41.9524 Ahg493451 indole-3-acetic acid inducible 14
42.2374 Ahg489353 CONSTANS-like 4
46.0869 Ahg491143 plasma membrane intrinsic protein 3
48.3735 Ahg483737 plasma membrane intrinsic protein 1B
66.8281 Ahg493886 chloride channel A
80.5357 Ahg923621 Photosystem II 5 kD protein
81.388 Ahg497524
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression