Detail



ID : Ahg898573

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|898573|Al_scaffold_0005_2539
Sequence
ATGGAGGAGG AGAAACCGGA GTTGACATTG TATAACACGA TGACTCAGTT GAAAGAAGTT TTTAAGCCGA TCAATCCCGG CAAGATCGGG ATGTATGTCT GTGGCATCAC CGCCTACGAT TATAGCCATA TTGGGCACGC TCGTGCCGCC GTCTCTTTTG ACCTCCTTTA CAGGTACTTA AGGCACTTGG GTTATGAAGT TAATTATGTC AGAAATTTTA CAGATGTTGA TGACAAGGCT AAAAAGTGTG GGGAGAAGCC GTTAGATTTG AGTAATCGCT TTTGCGAGGA GTATCTTCTA GATATGACTG CTCTTCAGTG CCTCCTTCCC ACCCGCCAGC CTCGTGTCAG TGACCATATG GAGCACATCA TTAAGATGAT AGAAAAGATC ATTGAAAACG GATGTGGGTA TGCTGTGGGT GGAGATGTGT TCTTCTCAGT GGATAAATCA CCGAATTACG GTCAATTATC TGGGCAACGA CTGGATCATA CTCAAGCTGG TAAGCGTGTT GCTGTTGACT CAAGGAAGCG CAATCCTGCT GACTTTGCAT TATGGAAGGC TGCAAAATCT GGTGAACCAA GTTGGGAGAG TCCTTGGGGT CCAGGAAGAC CAGGATGGCA CATTGAGTGC AGTGCCATGA GTGCTCATTA CCTGTCTCAG AGATTTGACA TTCATGGTGG TGGCGCAGAT CTAAAATTCC CGCACCATGA AAATGAGATC GCCCAGACAT GTGCTGCTTG TGAAGATAGT GGTGTGAATT ACTGGTTGCA TAATGGGCAT GTCACCAACA ACAATGTGAA GATGGGAAAA TCACTGGACA ACTTTTTTAC GATTAGAGAA ATCACGGCTA AGTATCATCC ACTGGCTCTG AGACACTTCT TGATGAGTGC ACAGTACCGT TCTCCTCTGA ACTATTCGGT GTCGCAGCTA GAGAGTTCAT CGGATGCTTT ATATTGTGTT TATCAGACAT TAGAAGACCT TGTTAAAGCT CTATCGCCAT ATCGAGAAGA AATGAGTGGA GATGTTGGAA AGACTCAACA GTCTGCGGAA GCCAAAGAGA TGATAAAGAA GGTGAAAAAC GCATTGAAAT TCATCAACGT TTCAATCTCC AAGCTCAAGA AAATTCAGAA AAAGCAGCGG ATGTCGCTGG TTGTGTCACT GGTCGAGGTT GAGAAAGCAG TGAGGGAAGT TCTTGATGTG CTTGGTTTGC TCACGACTCT AAGCTACGGT GAGTTTTTGA AAGAGATGAA ACAAAAGGCA TTAACAAGAG CAGGAATGGG AGAAGAAGAG GTCTTGCGGA GGATTGAAGA GAGGAGACTA GCCCGAAAGA ATAAAGATTT CAAGAGAAGC GATCAAATTA GAGAGTTGTT GGCAGCTAAA GGAATCGCCC TGGAGGATAT TCCTGGAAAA GACACGGTGT GGAGACCATG CACCCCTTTG AGCCTAAATC CGGTTTAG 
Length1458
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16891337.. 16893626
Download Sequence
A.thaliana
AGI-codeAT5G38830.1
DescriptionCysteinyl-tRNA synthetase, class Ia family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.8995 Ahg349529 non-intrinsic ABC protein 9
15.2971 Ahg490019 SNARE associated Golgi protein family
19.3907 Ahg938584
24.8998 Ahg908648 Protein of Unknown Function (DUF239)
32.311 Ahg950020 Tyrosine transaminase family protein
33.8526 Ahg930155 B-box type zinc finger family protein
34.3511 Ahg489269 sigma factor E
34.641 Ahg918938 Late embryogenesis abundant 3 (LEA3) family protein
36.6333 Ahg940600 Basic-leucine zipper (bZIP) transcription factor family protein
39.2683 Ahg493342 UDP-Glycosyltransferase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression