Detail


ID : Ahg907875

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907875|Al_scaffold_0002_956
Sequence
ATGAGAACAA ATCCTACTAC TTCGGATCCA GAGGTTTCGA TACGTGAAAA AAAAAACCTG GGACGTATCG CTCAAATCAT TGGTCCGGTA CTGGATGTAG CCTTTCCCCC GGGCAAAATG CCTAATATTT ACAATGCTCT GGTGGTTAAG GGTCGAGATA CTCTTGGTCA AGAAATTAAT GTGACTTGTG AAGTACAGCA ATTATTAGGA AATAATCGAG TTAGAGCTGT AGCTATGAGT GCGACAGAGG GTTTAAAGAG AGGAATGGAC GTGGTTGATA TGGGAAATCC TCTAAGTGTT CCAGTCGGCG GAGCGACTCT AGGACGAATT TTCAACGTGC TTGGGGAACC CGTTGATAAT TTAGGTCCTG TCGATACTCG CACAACATCT CCTATCCATA AATCCGCGCC TGCTTTTATA CAATTAGATA CAAAATTATC AATTTTTGAA ACAGGAATTA AAGTAGTAGA TCTTTTGGCC CCTTATCGTC GTGGGGGAAA AATTGGACTA TTCGGTGGGG CTGGCGTGGG TAAAACAGTA CTAATTATGG AATTGATCAA CAACATTGCT AAAGCTCATG GTGGTGTATC CGTATTTGGT GGAGTAGGCG AACGGACTCG TGAAGGAAAT GATCTTTACA TGGAAATGAA AGAATCTGGA GTCATTAATG AACAAAATCT TGCGGAATCC AAAGTGGCCC TAGTCTATGG TCAGATGAAT GAACCACCAG GAGCTCGTAT GAGAGTTGGT CTGACTGCCT TAACTATGGC AGAATATTTC CGAGATGTTA ATGAGCAAGA CGTACTTCTA TTTATCGACA ATATCTTCCG TTTCGTACAA GCAGGATCCG AGGTATCCGC CTTATTGGGT AGAATGCCTT CTGCTGTGGG TTATCAACCC ACCCTTAGTA CCGAAATGGG TACTTTACAA GAAAGAATTA CTTCTACAAA AAAGGGGTCC ATAACCTCTA TTCAAGCAGT TTATGTACCT GCAGATGATT TGACTGACCC CGCTCCTGCC ACCACATTTG CACATTTAGA TGCGACTACC GTACTATCAA GAGGATTAGC TGCCAAAGGT ATCTATCCAG CGGTAGATCC TTTAGATTCA ACGTCAACTA TGCTACAACC TCGAATCGTT GGCGAGGAAC ATTATGAAAC TGCGCAACAA GTAAAGCAAA CTTTACAACG TTACAAGGAG CTTCAGGACA TTATAGCTAT CCTGGGGTTG GACGAATTAT CCGAAGAGGA TCGCTTAACC GTAGCAAGAG CACGAAAAAT TGAGCGTTTC TTATCACAAC CCTTTTTCGT AGCAGAAGTA TTTACAGGTT CTCCGGGAAA ATATGTTGGT CTAGCGGAAA CAATTAGAGG GTTTAAATTG ATCCTTTCCG GAGAATTTGA TTCTCTTCCT GAACAGGCCT TTTACTTAGT GGGTAACATC GATGAAGCTA CTGCGAAGGC TACAAACTTA GAAATGGAGA GTAAATTGAA GAAATGA
Length1497
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8207699.. 8209195
Download Sequence
A.thaliana
AGI-codeATCG00480.1
DescriptionATP synthase subunit beta
TAIR curator summarychloroplast-encoded gene for beta subunit of ATP synthase
Alias[ATPB][PB][ATP synthase subunit beta]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg475565 ATP synthase epsilon chain
4 Ahg907857 ribosomal protein L16
4 Ahg915009 ribosomal protein L16
6.7082 Ahg311263 K+ efflux antiporter 1
9.48683 Ahg315497 ribosomal protein L22
10 Ahg497139
10.9545 Ahg926404 Phosphoglucomutase/phosphomannomutase family protein
12.9615 Ahg936802 ribosomal protein L16
15.6205 Ahg922817 plastid movement impaired1
16.4924 Ahg487785 peroxisomal NAD-malate dehydrogenase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression