Detail


ID : Ahg922817

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922817|scaffold_104098.1
Sequence
CAGCTTCTTA CTCTTTTTTC ATGGCAGGAG AATATTCCGG TAGCCGGAGT TCTAACACGC AGCTTCTCGC GGAACTCGAA GCTCTAAGTG AAAACCTTTA CCAGAAACCT CAGGTTTCAG TCGGAAACCG GAGAACCAAC TCTCTCGCTC TCCCGCGCAG TTCTGTTCCA TCGCTTGTTA CCTCTGCCGA TGAAGTGAGT ACAGCACGAG CTGAGGATTT GACAGTATCG AAGCCACGGG CTCGGCGTTT GTCGCTGTCT CCGTGGCGGT CGAGACCCAA GCTTGAGGTA GAGGAGGAAG ATAATGTGAC TCAGAACAAC AGGATTGTCA AGAAACCAGA GGAGTCATCG TCGGGCTCGG TTGCCAAGGA TGAGAAAAAA GGGATATGGA ATTGGAAGCC GATTCGAGGG CTAGTTCGGA TTGGTATGCA GAAGCTAAGT TGTTTGTTAT CAGTGGAGGT TGTGGCGGCG CAGAATCTTC CGGCCTCAAT GAACGGTCTA CGCCTTGGAG TTTGCGTGAG GAAGAAGGAA ACAAAAGACG GTGCCGTTCA GACGATGCCC TGTAGGGTTT CTCAGGGTTC TGCGGATTTT GAGGAGACAT TGTTCATCAA GTGCCATGTG TACTACACAC CGGCGAACGG AAAAGGTAGT CCGGCGAAGT TTGAGGCTCG TCCGTTTTTG TTTTATCTCT TTGCCGTGGA CGCCAAGGAA TTGGAGTTTG GAAGGCATGT GGTGGATTTG AGCGAATTGA TTCAGGAGTC GGTAGGGAAG ATGAGTTATG AAGGAGCTAG GGTTAGGCAA TGGGATATGA GTTGGGGGCT TTCAGGGAAG GCTAAAGGAG GTGAATTGGC TCTGAAATTA GGGTTTCAGA TCATGGAGAA AGACGGTGGA GCTGGGATTT ACAGTAAACA AGGAGAATTC GGGATGAAAC CGAGTAGTAA ACCTAAGAAT TTTGCTAATT CCTTCGGGCG AAAGCAATCG AAGACGTCGT TTAGTGTGCC GAGCCCAAAG ATGACGAGCC GGAGCGAGGC CTGGACGCCA GCGAGTGGCG CGGAGTCAGT AACAGATCTT CAAGGGATGG AGCATTTGAA TCTAGATGAA CCCGAGGAGA AACCCGAAGT GAAACCGGTT CAGAAAACAG AGGAACCAGA ACAGAGAGCT GAAGATGATC AAGAGGAACC TGATTTTGAA GTTGTGGATA AAGGAGTTGA GTTTGATGAT GACTTGGAAA CTGAGAAATC TGATGGAACC ATAGGGGAAA GATCCGTTGA GATGAAGGAA CAACATGTTA ATGTTGATGA TGCTCGGCAC ATAATGAGAC TTAGCGAGCT TGATTCGATT GCAAAGCAGA TCAAAGCGCT TGAATCGATG ATGAAAGACG AGAATGATGG AGGAGATGGT GAAACAGAGT CACAAAGGCT AGATGAAGAG GAACAAACGG TGACAAAGGA GTTTCTTCAG TTGCTTGAGG ATGAAGAAAC CGAGAAGCTC AAATTCTACC AGCACAAAAT GGACATCTCT GAACTGCGGT CTGGCGAATC GGTAGATGAT GAATCTGAGA ATTACCTCTC AGATCTCGGG AAAGGCATCG GTTGCGTTGT TCAGACGAGA GACGGTGGTT ACTTAGTTTC TATGAACCCT TTCGACGCGG TCGTTATGAG GAAAGACACT CCTAAGCTTG TTATGCAAAT CTCGAAACAG ATTGTGGTAC TACCAGAAGC CGGACCAGCC ACTGGATTCG AGCTATTTCA TAGAATGGCG GGTTTGGGTG AGGAACTAGA GTCAAAGATA TCTTCGCTTA TGGCGATAGA CGAGCTAATG GGGAAAACAG GGGAGCAAGT GGCTTTCGAA GGAATAGCGT CAGCGATTAT ACAGGGGAGG AACAAAGAGA GAGCGAACAC TAGCGCAGCG CGGACTGTTG CAGCTGTTAA AACAATGGCT AACGCAATGA GCAGCGGAAG AAGGGAGAGA ATAATGACCG GAATCTGGAA CGTGGAGGAG AATCCACTGA CGTCGGCAGA GGAGGTTTTA GCCGTCTCTT TACAGAAACT AGAGGAAATG GTGGTTGAAG GACTAAAGAT TCAAGCTGAC ATGGTGGATG ATGATGCACC TTTCGAGGTT TCCGCTGCCA AAGGTCAGAA GAATCCACTT GAATCGACCA TTCCACTTGA CGAGTGGCTA AAGGAGAATC GCACACAGAA AAAGCTAACA CTTTTGGCGA CAGTACAGCT CCGTGACCCG ACAAGGAGAT ACGAAGCGGT GGGAGGGACA GTGGTGGTGG CAGTACAAGC GGAAGAAGAG GAAGAGAAAG GGTTAAAGGT AGGAAGTTTG CACATTGGGG GAGTGAAAAA AGATGCGGCA GAGAAGCGGA GGCTTATGGC GGCGCAATGG CTTGTGGAAC ACGGAATGGG AAAGAAAGGG AAGAAGAAGA GTAATATAAA GAAGAAGGAG AAGGAAGAAG AAGAGGAAAT GTTGTGGAGC TTGTCATCTA GAGTAATGGC GGATATGTGG CTCAAATCTA TAAGGAACCC TGATGTGAGA TTGCATAGCT GATCTTTGAG ATATTCATAT TA
Length2572
Protein Sequence
Protein Residue
Map Locationscaffold_1: 20699400.. 20702044
Download Sequence
A.thaliana
AGI-codeAT1G42550.1
Descriptionplastid movement impaired1
TAIR curator summaryEncodes a plant-specific protein of unknown function that appears to be conserved among angiosperms.
Alias[PMI1][PLASTID MOVEMENT IMPAIRED1]
Gene coexpression
MR
MR Locus Description
7.48331 Ahg471868 high chlorophyll fluorescence phenotype 173
10.3923 Ahg943760 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
12.1244 Ahg487193 glutamate synthase 1
12.4097 Ahg484330 Hydroxyproline-rich glycoprotein family protein
15.6205 Ahg907875 ATP synthase subunit beta
20 Ahg914489 SPA1-related 4
22.3607 Ahg485107 peroxin 11B
24.2487 Ahg478862 Aldolase-type TIM barrel family protein
25.9808 Ahg492376 homeobox protein 22
26.9815 Ahg470732 fructose-2,6-bisphosphatase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression