Detail



ID : Ahg911507

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911507|Al_scaffold_0001_1761
Sequence
ATTGTTGGTG CAGAAAATCC GGTTTTGATA TCTGCGGCTG AGCAAATCTT CAGTGCTGGT GGCAAGAGGA TGAGACCGGG TTTGGTATTC CTTGTATCAC GAGCCACTGC GGAATTAGCT GGCTTAAAGG AACTTACAGT AGAACATCGG CGTTTAGGTG AGATCATTGA GATGATTCAC ACCGCAAGTT TGATACACGA TGATGTGTTA GACGAAAGTG ATATGCGAAG AGGAAAAGAA ACGGTTCACG AGCTTTTCGG AACAAGAGTA GCTGTATTAG CTGGAGATTT CATGTTTGCT CAAGCATCAT GGTACTTAGC AAATCTCGAA AACCTCCAAG TCATTAAGCT CATAAGTCAG GTAATCAAAG ATTTTGCAAG CGGTGAGATA AAGCAAGCAT CAAGTTTATT CGATTGTGAT GTCGAGCTTG ATGACTACTT GCTAAAGAGT TACTACAAGA CAGCTTCATT AGTAGCTGCA AGCACCAAAG GAGCTGCAAT TTTCAGTAAA GTCGAAAGCG AGGTCGCAGA GCAAATGTAT CAGTTCGGAA AGAATCTCGG TTTATCTTTT CAAGTAGTTG ATGACATTCT GGACTTCACT CAATCCACAG AGCAGTTAGG GAAACCTGCA GCTAATGACT TAGCCAAAGG TAACATAACA GCGCCAGTGA TCTTCGCACT AGAGAATGAG CCGAGGCTAA GAGAGATCAT TGAGTCTGAG TTTTGTGAGC CTGGATCGCT TGAAGAAGCG ATTGAAATAG TTAGAAATCG CGGTGGGATC AAGAAAGCTC AAGAATTGGC TAAGGAGAAA GGTGAGCTTG CGTTAAAGAA TCTGAATTGT CTTCCGAGAA GTGGTTTCAG ATCGGCTCTT GAGGATATGG TGATGTTTAA TCTTGAAAGG ATTGATTAG 
Length909
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21845989.. 21847155
Download Sequence
A.thaliana
AGI-codeAT1G17050.1
Descriptionsolanesyl diphosphate synthase 2
TAIR curator summaryEncodes a protein with solanesyl diphosphate synthase activity.
Alias[AtSPS2][SPS2][solanesyl diphosphate synthase 2]
Gene coexpression
MR
MR Locus Description
21.5174 Ahg939527 Aldolase-type TIM barrel family protein
39.064 Ahg910330 FTSH protease 8
46.1194 Ahg492978 NAD(P)-binding Rossmann-fold superfamily protein
52.1824 Ahg493645 P-loop containing nucleoside triphosphate hydrolases superfamily protein
55.857 Ahg485645
62.2254 Ahg491767
74.2428 Ahg489269 sigma factor E
80.6722 Ahg478286 Tetratricopeptide repeat (TPR)-like superfamily protein
83.0361 Ahg923463 FTSH protease 1
84.9412 Ahg482547 Uncharacterised protein family (UPF0497)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression