Detail



ID : Ahg912743

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|912743|Al_scaffold_0001_2997
Sequence
ATGGCGAGTC TCTGTCTCTC ATCGTCCCGG ATCGTTTCTC TTCACCACCA GAAACCCTTT GTCTCTCTAA AACTCCGGCC TCGTCCTACA GATATCTCCG GTCTAGATCG CTGCACGAGT ACTGTTTGCT TCAATCCTCT TAGATTATCA GGTGATCGTC AGCGAACCTC TACGGTGTCG GCGAGGGTTG AGAAGCGGCG AAAGAGTGTG GTTTGTTATG CAGCTCCGAT TTCTGTCGAT AGTCTACAAT GGATCTCGAC CATTTCTTGC CTTGCATTGA TGCTTGCAAG GGGTACTGCT ATCCATAAGT CCGTTGTTGT TCCACTATTC GCTCTACACG CACCATCGAG CATCATCACT TGGATAAAGG GAGAGTATGG CGTCTGGGCA GCATTCTTGG CGCTTATTGC TCGACTGTTC TTCACTTTTC CAGGTGAACT TGAGCTGCCC TTCATTGCAT TACTCTTGGT GATTGTGGCG CCATATCAAG TTATGAACAT AAGAGGGAAG CAAGAAGGGG CAATCATATC AATAGCAATA TCTTGTTTTC TGGCTTTCCA ACATTTCTCA CGAGCAGGGA GCTTGGAGAA AGCATATGAG AAGGGTTCAG TTCTTGCCAC TGTAGCCATA ATTGGTGTCA CAGTTAAACC CTTTCTCTCT CTTAAACTCC GGCCTCGTTC GTCCGATCTC TCCCGTCTAG GTCACTGTAC TAGTGCTGTT TGCTTCAATC CTCTAAGGTT ATCGGCTGAT CGTCAGCGAA TCGGTACGGT GTCGGCGAGG GTCGAGAAGC GGCGAAAGAG AGGATCGAGT GTGGTCTGTT ATGCTACTCC GATGTTGTCT GTTCATAATC TACAATGGAT CTCGACAATT TCTTGCGTTG CATTGATGTT TGCAAGGGGT ACTGCTATCC AGAAGTCCTT TGTTGTTCCA CTATTTGCAC TACAAGCACC ATTGGGCATT GTCTCCTGGA TGAAGGGTGA ATATGGCATC TGGGCAGCAT TCTTGGCGCT TCTTACACGA CTATTCTTCG CTTTTCCAGG TGAACTTGAG CTTCCATTCA TTGCATTACT TTTGGTGATT GTGGCGCCAT ATCAAGTTAT GGGCATAAGA GGGAAACAAG AAGGTGCTAT CCTTTCTTTA GCTATCTCTT GTTTTCTGGC TTTCCAGCAT TTCTCAAGAG CAGGCAACTT GCAGAGAGCA TTTGATCAGA GTTCAGTTCT TGCCACTGTA GCCATAATTG GTGTCACAGT TGTATCATGG AGCTTGTTTT GGGTGTCACT GTCGGGTGCC TACCTGGTTT GGAGTGCTGC AGAGGTTGCT GAACTCGGAA GCCCGGTTGG CTCTGCTACG CCGAAGGGTG GTCCAGAACC AGTTATGCCT GTAGTTGGAG TTGTTATTGG GGGTGGGTAT GTAGATGGTG GGGAATTAAA ATCTGGTGGA CTCATTTGA 
Length1449
Protein Sequence
Protein Residue
Map Locationscaffold_1: 12297814.. 12301898
Download Sequence
A.thaliana
AGI-codeAT1G29390.1
Descriptioncold regulated 314 thylakoid membrane 2
TAIR curator summaryIntegral membrane protein in the inner envelope of chloroplasts. Provide freezing tolerance.
Alias[COR314-TM2][COR413IM2][cold regulated 314 thylakoid membrane 2][COLD REGULATED 314 INNER MEMBRANE 2]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg481805 outer plastid envelope protein 16-1
3.16228 Ahg902253 cold-regulated 15a
5 Ahg486818
6.7082 Ahg949787 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
7.2111 Ahg919881 Pyruvate phosphate dikinase, PEP/pyruvate binding domain
7.34847 Ahg483346 cold regulated 15b
11.3137 Ahg925737 glutamate decarboxylase 2
12 Ahg944923 Low temperature and salt responsive protein family
13.4907 Ahg930731
14.2478 Ahg334956
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression