| Annotation |
|---|
| Description | jgi|Araly1|949787|scaffold_801674.1 |
| Sequence |
AAAGAAAAAA ATCTTTGGCA GATGGATCAA ACCGCGGAAC CACCACTCAA CACACACCAG CAGCAACCAG AAGAAGTTGA ACATCGTGAG AATGGTGCGT CTAAGATGTT TAGGAAAGTA AAGGCAAGAG CTAAGAAGTT CAAGAACAGT ATTACTAAAC ATGATCAAAG CAATGAGCTT GATCATGATG TAGTTGAAGA AGATGATGAA GATGACGAGC TAGAACCAGA AGAGATCGAT GCACCAGGTG TAAAAGGTAA ACCAGAGTCT CTGAGTCATC CGAGAGAAAC TAATGTTCCG GCAGCGGAGG AGATTGTTCC TCCAGGGACA AAGGTGTTTC CTGTCGTGTC TTCCGATTAC ACCAAACCCA CTGAATCTGT ACCATCACAG GATACCTCTT ACGGACACGA TGCACCGGCT CATTCTGTAA GAACGACGGA TACATCGGGC AAGGAAGAGA GCAGAGAGGC TCATCACGAG GCAATGGACA CTCCTCTGCT TTCTGCGACA GAGGATATCA CGAGGACGTT TGCTCCTGCT GGTGAAGATG ATTATCTTGA TGGTCAACGG AAAGTCAACG GCGAGACACC GATCAAGTTG GAGGAAGATC CGGCTCTTAC AGGAGGAGGT TCTGATTATC TTAGTGGTGC ATCTAATTAT CAGTCCAAAG TTACTGATCC CACCAAAGAA GGAAGTGGAG AAGCTAGAGT ACCGGAGATT ACTGAGTCTC TTGGTAATAT GAAAGTGACT GATGAGTCTC CTGATCAGAA ACAAGCACAA GGATTTGAAA GAGACTTGTC GACGAGAAGC AAAGAATTCA AAGAATTTGA TCAGGACTTC GACTCTGTTC CCAGCAAGGA TTCGCCGGTG AAATTTGCAG GTGAATCAGA AGCTGAGCTA GAAAAAGATT TTCCGATGAG AAGCCATACA GAATCTGGAA TCGACAAGAA TTCTCCGACG GGCTTCGGTG GCGAATCAGA AGCTGAGCTA GAAAAAGATT TTCCGATGAG AAGCCATACA GATTCTGGAA TCGACAAGAA TTCTCCGACG GGCTTTGGTG GCGAATCAGA AGCTGAGCTA GAAAAAGATT TTCCGATGAG AAGCCATACA GATTCTGGAA TCGACAAGAA TTCTCCGACG GGCTTCGGTG GCGAATCAGG AGTTGAGCTA GAAAAAGATT TTAAGACGAG AAGCCATGAT TTTGATATGA AGACTGAAGC TGGAACGGAC ACGAATTCTC CATCAAGAAG CTATGAGTTT GATCTGAAGA CAGAATCTGG AAACGACAAG AATTCTCCGC TGGGATTTGG TAGTGAATCA GGAGCTGAGC TGGGGAGAGA ATTGCCGACG GGAAGTGATG AATTTGATCA GAAGATTGAA TCTGGAAGAA ACGAGTATTC GCCGGAATCT GACGGCGGAT TAGGAGCTCC GTTGGGAGGA AATTTTCCGG TGAGAAGTCA TGAGTTGGAT CTGAAGAACG AATCTGGTAT CGACAAAAAT TCGCCGACGG GATTTGACGG GGAACCAGAT TTTCTGGCGA AGGGGAGACC TGGATACGGC GAGGCATCAG AAGAGGATAA CTTTTCGGCG AAAAGTGATG ATGAGACTCA TGATCAATTC TCACCGGAAC TATCTCGTCC TAAAGAGAAA GATGAGTTTA AGGAGTCCAG AGATGATTTT GAGGAGACGA GAGATGAGAA AACAGAGGAG CCAAAAACGA CCACTTACAC AGAGAAGTTT GCTTCAATGC TAGGTTACTC CGGAGAGATT CCGGTGGGAG ATCAAAGTGA AGTGACGGGA ACTGTTGATG AGAAGTTGAC ACCTGTCAAT GAGAAGGATC AAGAAACAGA GTCTGCCTTG ACGACGAAGT TACCTCTCTC TGGAGGTGGA AGTGGAGCGG AGGAGCAACG AGGGGAAGAT AAAAATGTGT CGGGTAGAGA TTATCCGGCG GAGAAACTGA CGCCTGAAGA AGAAGACAAA GCTTTTTCTG AGATGATTGC TGAGAAGCTT CAGATTGGAG GAGGAGAAGA GAAGAAGACA ACGACGACAA AGGAAGTGGA GAAGATCCCT ACCGAGAAGA CGTCGGAGGA GGGAGAACAA GGTGAGGCGG TGGATGAGGA AGTGAAAGGA GGAGGAGGAA TGGTTGGGAG GATTAAAGGA TGGTTTGGTG GTGCTGCGAC GGAGGAGGTG AAGCCAAAAT CGCCACATTC TGTTGAAGAG GCTCCAAAAA CATCCGGCTT GTTTGGTGGT GGTGCGACGG AGGAGGTGAA GCCGAAATCG CCACATTCCG TTGAAGAGTC TCCACAATCA CTTGGCTCAA CCGTTGTTCC GGTGCATAAG GAGCTTTAAG AATATGAGAA CTGAGATTTA |
| Length | 2370 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14166708.. 14169413 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G52310.1 |
| Description | low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) |
| TAIR curator summary | cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression |
| Alias | [COR78][LTI140][LTI78][RD29A][COLD REGULATED 78][LOW-TEMPERATURE-INDUCED 78][RESPONSIVE TO DESSICATION 29A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg902253 | cold-regulated 15a |
| 1.73205 |
Ahg334956 | |
| 2 |
Ahg483346 | cold regulated 15b |
| 3 |
Ahg941255 | |
| 3.16228 |
Ahg481185 | Late embryogenesis abundant protein, group 6 |
| 3.4641 |
Ahg485985 | Regulator of chromosome condensation (RCC1) family protein |
| 5.47723 |
Ahg488447 | stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) |
| 6.32456 |
Ahg495838 | Fibronectin type III domain-containing protein |
| 6.7082 |
Ahg912743 | cold regulated 314 thylakoid membrane 2 |
| 6.9282 |
Ahg311978 | galactinol synthase 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|