Detail



ID : Ahg944366

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944366|scaffold_700595.1
Sequence
CCCCAAAATT GCAGAGCAAA AATGTCTCGC AGATCGCTAA CTCTCCTCAA GAATCTAGCT AGAAACGCGA ACGGATCAGG TTTTCAAACC CGATCCGTGA CTTACATGCC TAGACCCGGT GACGGAGCAC CACGCGCAGT GACGCTGATT CCAGGAGATG GAATCGGACC TCTGGTAACG AACGCCGTGG AACAGGTGAT GGAAGCGATG CACGCGCCGA TCTTCTTCGA GAAGTACGAT GTTCACGGAG AAATGAGCCG TGTGCCGGCG GAAGTGATGG AGTCGATAAG GAAGAATAAG GTTTGTTTGA AAGGTGGGCT TAAGACTCCT GTTGGTGGTG GTGTTAGTTC GCTTAACGTC CAGCTTAGGA AAGAGCTTGA CCTCTTTGCG TCTCTGGTCA ACTGTTTTAA TTTGCCTGGT TTACCTACTC GCCATGAAAA TGTTGACATC GTTGTCATCA GAGAGAACAC TGAAGGTGAG TATGCGGGGC TTGAGCATGA GGTTGTTCCT GGTGTCGTTG AGAGCCTTAA GGTGATCACG AAGTTCTGTT CCGAGCGTAT TGCCAAGTAT GCTTTTGAGT ATGCCTACCT GAACAACAGG AAGAAAGTTA CAGCGGTGCA TAAGGCTAAC ATCATGAAAC TTGCGGACGG TTTGTTCTTG GAATCTTGTC GGGAGGTTGC TAAAAAGTAT CCGAGCATCA CCTACAATGA AATCATTGTT GATAACTGCT GTATGCAACT TGTAGCGAAA CCAGAGCAAT TCGATGTCAT GGTAACGCCC AATCTCTATG GGAATTTAGT TGCAAACACT GCTGCTGGTA TTGCTGGAGG CACAGGAGTC ATGCCTGGAG GAAATGTTGG GGCTGACCAT GCGGTATTCG AGCAAGGTGC ATCAGCAGGA AATGTTGGGA AAGATAAGAT AGTATTGGAA AACAAAGCAA ACCCAGTGGC ATTGCTTCTC TCATCAGCGA TGATGCTAAG ACACCTTCAG TTTCCTTCAT TTGCTGACCG GCTTGAAACA GCAGTGAAGA AAGTCATCGC TGAAGGAAAG TGCCGGACGA AAGATCTTGG TGGCACAAGC ACGACTCAAG AGGTCGTTGA TGCGGTCATT GCAAAATTAG ACTGACTTTG ACAAATTACG TGTTCGTTCC CTCTCTGCTA CAGATTTTGT GTTGCCAAAA TATGGGGTAT GATCCAAGCC CAACGGTTAT CTGGTTTTGT ACCTCGAGTT TTATTATATT 
Length1240
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2249307.. 2251537
Download Sequence
A.thaliana
AGI-codeAT4G35260.1
Descriptionisocitrate dehydrogenase 1
TAIR curator summaryEncodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.
Alias[IDH-I][IDH1][isocitrate dehydrogenase I][isocitrate dehydrogenase 1]
Gene coexpression
MR
MR Locus Description
8.83176 Ahg923761 NUP50 (Nucleoporin 50 kDa) protein
10.4881 Ahg480601 ubiquitin family protein
10.9545 Ahg486936 HEAT repeat-containing protein
12.9615 Ahg493647 yeast YAK1-related gene 1
13.2288 Ahg929571 lipoamide dehydrogenase 2
15.2971 Ahg918231 RNA-binding KH domain-containing protein
16.6132 Ahg922941 AAA-type ATPase family protein
18.6548 Ahg492725 vacuolar protein sorting-associated protein 28 homolog 1
21.3542 Ahg472692 Actin cross-linking protein
26.2679 Ahg496632 GTP cyclohydrolase II
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression