Detail



ID : Ahg322443

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322443|fgenesh1_pm.C_scaffold_4002500
Sequence
ATGTTGAACC TCATTGCTTT CCTCCGCCGT CGTCTCCGCC GCCCCCGGAA AGCCAGAATC TCCGTCAACC ACCACCGCTC AGGTGATACT TCTCCGGAGA CTCATCATCA TCATCAGAGT GGTACCAATG GGTTTCCATC GGCAGCCGCT ATTCACCCAA ACCCGGAGAA AACCATCACA GTGGCCACCT TTAACGCTGC TATGTTCTCC ATGGCTCCCG CCGTCCCAAA CAACAAGGGT TTGCCATTCC GGTCCAAGTC AACCGTTGAC CGCCCCAAGA GCATTCTCAA GCCCATGAAC GCCGCCGCCA CTCCTACTCA TGACTCCAGA AAACAAGAGA GGTTTGCCAA ATCAAGGCCT AGGGTCTCCA TCAATCTCCC CGACAACGAG ATCAGCCGCC AGCTCAGCTT CCGGGAGGAT CCACAGCACT CTCCTCTCAG GCCTGCTCTC TCTTTCTCCG GCGAGGTCGG TCTCCGGAGC ACCAGAACGG CTCTGGAAGT GCTGAGGGAG CTAGACGCAG ACGTGCTGGC TCTGCAAGAC GTCAAGGCTG ACGAGGCTGA CCAAATGCGA CCGCTCTCCG ATCTCGCCGC CGCGCTGGGG ATGAATTACG TCTTCGCTGA GAGCTGGGCG CCGGAGTACG GCAACGCCAT TCTCTCTAAG TGGCCCATCA AAAGCTCCGA TGTTCTAAGA ATCTTCGACG ACACTGATTT CAGGAACGTG TTGAAGGCGA GCATAGAGGT TCCGGGGAGC GGGGAAGTGG AGTTTCACTG CACTCATCTT GATCACTTGG ACGAGAAGTG GAGAATGAAG CAAGTCGATG CCATTATCCG ATCCACCAAC GTACCCCACA TTCTCGCTGG TGCTCTCAAT TCTCTCGACG AATCCGATTA TTCTCCTGAG AGATGGACCG ACATCGTCAA GTATTACGAA GAGATGGGTA AGCCGATACC AAAAGCACAA GTGATGAGAT TCTTAAAGAG CAAAGAATAC ACTGACGCTA AGGACTATGC TGGAGAATGC GAATCTGTGG TTGTTGTCGC CAAAGGCCAA AGTGTGCAGG GGACATGCAA GTACGGGACA CGCGTGGACT ACATACTGGC TTCCTCGGAT TCACCGTACC GGTTCGTGCC AGGGTCGTAT TCGGTGTTGT CTTCCAAAGG GACCTCGGAC CATCACATAG TCAAAGTCGA TGTTGTAAAA GCTAGAGCGA TCAACGTCGA CGAGCAGCGA CCGATAAGAC ACAAGCTGCA GAGAGTTACT GCAGCGACGA CTACGTATAA TAATAACTCG TCTCTCACAA AGGCCTCGTG GAGGACACAT TACTATAAAG CGTGA 
Length1335
Protein Sequence
Protein Residue
Map Locationscaffold_4: 22071101.. 22073168
Download Sequence
A.thaliana
AGI-codeAT2G48030.1
DescriptionDNAse I-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.8322 Ahg918799 cytochrome P450, family 86, subfamily A, polypeptide 4
12.8841 Ahg488871 tubulin alpha-5
20.0749 Ahg478354 Reticulon family protein
20.6398 Ahg905564 Leucine-rich repeat (LRR) family protein
22.0907 Ahg497051 Leucine-rich repeat (LRR) family protein
22.383 Ahg471290 xyloglucan endotransglucosylase/hydrolase 8
25.6125 Ahg890682 P-loop containing nucleoside triphosphate hydrolases superfamily protein
33.1964 Ahg483352 tetratricopetide-repeat thioredoxin-like 3
33.5261 Ahg485907 Pectin lyase-like superfamily protein
35.7491 Ahg492514 WRKY family transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression