Detail



ID : Ahg918993

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918993|scaffold_100274.1
Sequence
CTCAAGTAAT ACAGAAAGAT TATGGATTTA GATGCATGGG AAATCATCCA TATACCTGAA AAGCCTGCAT TGTCACCTGA CCATCAGCCC ACTGTAAAGG TATATGCGAG TCTAATTAAA CCCAAATTTG CCAATATGAT AGTCAGGCAT TTATGTAAGA TTGCTCCTCT AGAAGATCTT CGCCATGTTA AAAGGGTGAA GAAGAAGATT CTTCCAGATA GCGGTGAAAC TCAGTTGACT GTCATCTTAT GTCTAGCACC TGAGCACCAC GATCAATTGA ACAATATGCC ACCTGATGTG CAGAAACTCG TTGATCCCTA TGAGTTGAGT CCTTTTATTA CACAAGTATG CAAATATGCT GCGGTATCAA AAGAAGAGTG GGAAGAACAG AGTAAGATAT GGCCAACTTC TTTTCACCCC CCAACTTACA ATATAGATGG CATCGGTGGG TTCAGCGAGG AGGATACACA ATCGATCTGC AAGTTCATGA GAGTTGTTAT TGATATGGCA GTATCTGGTC ATAAACCACT TGTAAATGCT GCAGTGATAG TTGATCCTTC AGTTAGGCGA ATAATAGCTA GTGAAACTGA TCAAGTATAT GCATCATCTG CTCCTCGCGA CAATACTAGC GCAGGGACCA GGCCCTTCAA GGAAACAGGG GAAATATGCT TAAATGGCAT ACTTGAAAAA CAGAATTGTT CGTTGTCTGC TGTTGCTTGT CTAAATCCCT GGCAATGGAG TTTGCAGCCG CATGACACTG AAATTTGTAG CCAATGGAAT CCTCTTAGGC ATGCTTCCAT GGTTGCCATT GAATCTTCTT CGGCCAGAGA TAGACATCTG TTTCCCAATT CATCCGAGAT TTTTGGTCAG GATCATGTTC AGCCCTCAAA TACAGATTCT CCGGCTAAAA AGCAGAAAAC AAGCAGTCAG AGTCCAGACG TCCAAAGTGA CGGCGAAGAA GAGACTCTTA GACATCCTTC AATGGAAAGG CCGTACCTCT GCACTGGTTA TGACATTTTC CTCCTGTTGG AGCCCTGTGC AATGTGTGCT ATGGCGCTTG TGCATCAAAG AATAAAACGG ATTTTCTATG CTTTTCCAAA CCCCACGGCA GGTGGTCTCG GGAGTGTTCA TAGACTTCAA GGGGAAAAGA GTTTGAACCA TCATTATGCA GTGTTTAGAG TTTTGCTGCC TGATGACGCA CTTAGGCAAA TGACCATGGT CTAATGCATT GTTGTAGTCG ATCG 
Length1244
Protein Sequence
Protein Residue
Map Locationscaffold_1: 905947.. 908241
Download Sequence
A.thaliana
AGI-codeAT5G24670.2
DescriptionCytidine/deoxycytidylate deaminase family protein
TAIR curator summary
Alias[EMB2820][TAD3][EMBRYO DEFECTIVE 2820][tRNA adenosine deaminase 3]
Gene coexpression
MR
MR Locus Description
20.2731 Ahg350146
27.4773 Ahg492776 G10 family protein
34.176 Ahg323761 gamma response gene 1
51.4101 Ahg934616 phosphorylethanolamine cytidylyltransferase 1
79.5487 Ahg927006 enoyl-CoA hydratase 2
90.305 Ahg492207 Protein phosphatase 2C family protein
91 Ahg332278 Zn-dependent exopeptidases superfamily protein
97.7343 Ahg492738 PapD-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression