Detail



ID : Ahg920166

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920166|scaffold_101447.1
Sequence
TTTGGAATTG AAAAATCACA GATGCCGAAA CCTTGGGGTG GAATCGGCGC ATGGGCCGAT GAGGCTGAGC GTGCCGATGA AGAGCAAGCT GCTGAAGCTA CAGCCACGGC GGCGGATTCA CAGAGTTTCC CGAGTTTGAA AGAGGCTGCG ACTGCTAAGT CTTCTAAGAA GAAGAAGAAG ATGACTTTAT CGGAGTTTAC CAAAGGAGCA TACACTGCTC CGAGTTCTGC TGGATTGACG AGGGAACAGA TGCTTCAGCT TCCTACTGGT CCAAGACAAC GTTCTGAGGA GGAAATGCAA CCTGGTCGTC TCGGTGGTGG GTTCTCTTCT TATGGTGGAG GAAGGTCTAG TGGACCTCCG GGGAGAATGT CACGAGATCG AGAGGATTCT GATGGGTCTT GGGGCGGTGG TGGTGGTGGT AGGAGATCTT ATGGCGGATT TGATGATGAT CAGAGAGGAT CTAATTCTAG GGTTTCTGAT TTCCCACAAG TGTCTAGGGC TGATGAAGAT GATGATTGGG GAAAAGGAAA GAAATCGCTT CCTTCGTTTG ATCAAGGACG TCAAGGTAGT CGTTATGGTG GTCTTGGAGG CGGGGGTGGT GGTGCTGGCA GTTATGGCGG AGGAGGTGGT GGTGCTGGCA GTTATGGCGG CGGAGGTGGT GGTGCTGGTG GTGGAGGTGG ATTCTCTAAA GCTGATGAGG TTGATAATTG GGCAGCGGGT AAAGCAAAAT CATCTACATT TGGGTCGGGT TTCCGTGACT CTGGACCGGA GCCTGACCGG TGGGCTCGAG GAGTCCTCCC TTCCGGTGGT GGTGTTCAGG AGGAGCGTCG TCGTCTTGTA TTGGAACCAC GAAAGGTTGA TGCAGGAGTG AGTGAAACTC CAACTGCTGG GAAGACGAGT AAGCCAAACC CATTTGGAGC TGCTAGACCG AGAGAGCAAG TTTTGGCGGA GAAAGGCTTG GACTGGAAGA AACTTGACTC GGATATTGAG GCCAAAAAGG GACAAACAAG CAGACCATCG AGCGCGCAAT CCAGCAGACC ATCAAGTGCT CAATCTAACA GGTCCGAGAG TTCAGCATTG AACAATGTGG AGAATGTGGT GAAACCGAGA CCAAAGGTGA ATCCTTTCGG TGATGCAAAA CCTAGGGAAG TATTGCTGGA GGAACAAGGG AAAGATTGGC GCAAGATTGA TTCTGAACTC GAGCATCGCA GGGTTGACAG GCCTGAAACA GAAGGAGAGA GGATGTTGAA GGAAGAGATC GAAGAACTAC GGAAGAAACT CGAGAAGGAA GCAGCTATTG CACCTGAGAG CAAGGAATCT CAACAGGAAT CCTACAGTAA TCACCAAAAT CTACCGGATC TCATACGCGA GAAAGAAAAG GACCTGGACT TACTGATCCG TGAACTGGAC GACAAAGTCA GGTTCAGGCC ACGAGCAGTT GAGAGGCCTG GATCCAGTGC AAGCAGAGCC GGTTCCTATT CAGAAAGACC TCATTCACGG GCTGGATCAA TCGATGAGTC TAGGAACGTC GAATCCATGG AAAGACCTAG ATCACGTGGC ACAGGCGATA ATTGGCCAAG ACCAGTAGAT GATCGAAGAA ACTTCCAAGG AAGCAAGGAA CGTGGATTCT TCAGCAACAG AAACTTCGAC AGGTCATCAT CGTCAAGGGA AGGATGGTAA AAAAGGAAAC TAAGGATGAA T 
Length1701
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5148761.. 5151468
Download Sequence
A.thaliana
AGI-codeAT1G13020.1
Descriptioneukaryotic initiation factor 4B2
TAIR curator summaryEncodes eIF4B2, eukaryotic initiation factor 4B2.
Alias[EIF4B2][eukaryotic initiation factor 4B2]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg896503 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
12.6491 Ahg947400 NADH-ubiquinone dehydrogenase, mitochondrial, putative
14.9666 Ahg890682 P-loop containing nucleoside triphosphate hydrolases superfamily protein
18.6815 Ahg946627 pentatricopeptide (PPR) repeat-containing protein
33.9117 Ahg490411 ABC transporter 1
35.2136 Ahg480991
36.8239 Ahg477651 TCP-1/cpn60 chaperonin family protein
37.7889 Ahg944434 squalene synthase 1
38.0657 Ahg923204 DEA(D/H)-box RNA helicase family protein
38.4708 Ahg477686 plastid transcriptionally active 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression