Detail



ID : Ahg947400

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947400|scaffold_703629.1
Sequence
CGATACAGAT CCACAACGCC ATGGGTTTAG GCATCTTAGC TTCTCGAACA ATTCGACCAG CTTCTCGTCT TCTTCAATCA CACAACTCCA ATTTCTTCCT CCGCACCATC GTCTCCAAAC CAGAGCTCCA ATCTCCTGAA TCCGCTGCTG TCTCTGAGCC TGAGCCACCG ACACAGATTC TCCCTCCTAG AAACCCTGTA GGTGGAGCAC GCGTCCATTT CTCGAATCCT GAAGATGCGA TCGAGGTTTT CGTTGATGGT TACGCGGTCA AAGTTCCTAA AGGATTCACT GTTCTTCAGG CTTGTGAGGT CGCTGGAGTT GATATTCCAA GGTTTTGTTA TCATTCTCGT TTGTCTATTG CTGGAAATTG TAGGATGTGT CTTGTTGAAG TCGAGAAATC TCCTAAGCCT GTAGCGTCTT GTGCCATGCC TGCACTTCCA GGGATGAAGA TTAAGACTGA CACACCGATA GCGAAGAAGG CGAGGGAGGG AGTGATGGAG TTTTTGTTGA TGAATCATCC TTTAGATTGC CCTATTTGTG ATCAAGGAGG AGAGTGTGAT CTTCAGGATC AGTCTATGGC TTTTGGATCT GACAGAGGTC GTTTTACTGA GATGAAAAGA TCTGTTGTTG ATAAGAACCT TGGTCCTCTT GTGAAGACTG TTATGACTCG GTGTATCCAG TGTACAAGGT GTGTACGATT TGCTTCAGAA GTTGCTGGAG TTCAGGATCT TGGTATACTA GGTCGTGGTA GTGGAGAAGA AATTGGAACT TATGTTGAAA AGCTTATGAC CAGTGAACTC TCTGGAAATG TTATAGACAT CTGTCCTGTT GGAGCCTTGA CCTCAAAGCC CTTTGCCTTT AAAGCGAGAA ACTGGGAGTT GAAAGCAACA GAAACCATTG ATGTTAGTGA TGCTGTTGGG TCCAACATCC GCGTTGATAG TAGAGGACCA GAAGTGATGC GTATCATTCC ACGCCTTAAT GAGGATATAA ACGAAGAATG GATATCTGAC AAAACCCGAT TCTGTTATGA CGGTTTGAAA AGACAAAGGT TGAGCGACCC TATGATCAGA GATTCCGATG GACGATTCAA GGCAGTGAGC TGGCGTGATG CCTTGGCTGT TGTGGGTGAT ATCATTCATC AGGTGAAACC AGATGAGATT GTTGGCGTAG CAGGTCAGCT ATCTGATGCG GAATCCATGA TGGTACTGAA GGACTTCGTT AACAGAATGG GTTCAGACAA TGTCTGGTGT GAAGGAACAG CTGCTGGTGT TGATGCTGAT CTTAGGTATA GTTATCTGAT GAACACTAGT ATCAGTGGAC TTGAGAACGC CGATCTCTTC CTTCTAATTG GTACCCAGCC TAGGGTTGAA GCTGCAATGG TGAATGCTAG GATCTGCAAG ACAGTCCGTG CATCAAATGC CAAGGTTGGA TATGTTGGTC CACCTGCAGA GTTCAACTAC GACTGCAAAC ACCTCGGGAC TGGGCCTGAT ACCCTCAAGG AAATCGCTGA GGGACGACAC CCATTCTGTG CGGCTCTCAA GAACGCCAAA AACCCTGCAA TCATTGTTGG TGCTGGGCTC TTCAACAGAA CTGATAAAAA TGCTATCCTC TCTTCTGTGG AATCCATCGC ACAAGCCAAC AATGTCGTCC GACCAGACTG GAACGGTCTC AACTTTCTCC TTCAGTATGC TGCTCAAGCG GCTGCTCTTG ATCTCGGTCT CATTCAACAG TCCGCCAAAG CCCTCGAGTC TGCAAAATTC GTCTACTTGA TGGGAGCAGA CGATGTAGAT GTTGAGAAGA TTCCTAAAGA CGCCTTCGTG GTTTACCAAG GACACCATGG AGACAAAGCG GTTTACCGTG CAAACGTAAT TCTCCCTGCA TCGGCCTTCA CCGAGAAAGA AGGAACCTAT GAAAATACTG AAGGATTTAC CCAACAGACT GTTCCAGCTG TTCCAACAGT TGGTGATGCA AGAGATGATT GGAAGATTGT GAGAGCCTTA TCCGAGGTCT CGGGTGTGAA GCTTCCATAC AACTCAATCG AAGGTGTTAG ATCAAGAATC AAGAGTGTTG CACCAAATCT AGTCCACACA GATGAACGAG AGCCAGCTGC TTTTGGGCCT TCATTGAAAC CCGAGTGCAA GGAGACAATG AGCGCAACAC CATTCCAACC CGTGGTTGAG AATTTTTACA TGACAAACTC GATCACAAGA GCATCAAAGA TCATGGCGCA GTGCAGTGCC GTGCTCTTGA AGAAGTGAGA GCTTTTAACT TGCTATGGTT TTCACATTTT TTTTCTCTTT CGCAAAAATA AAGATACTGA TTCTTCGTTT GCTCTCCTAT TTACCGACCT TTTGTGTAAG CCGAGTATCA CTGTATCTCG GGTTTAGCTT GCGGTGAAAT CTATAAGCAA TTTGCAATAA GCACATTGTT AGATTCAAAA CTTTGCAGTG TTAATTGGAT GCTTTG 
Length2466
Protein Sequence
Protein Residue
Map Locationscaffold_7: 19290662.. 19294005
Download Sequence
A.thaliana
AGI-codeAT5G37510.2
DescriptionNADH-ubiquinone dehydrogenase, mitochondrial, putative
TAIR curator summaryEncodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.
Alias[CI76][EMB1467][embryo defective 1467]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg923204 DEA(D/H)-box RNA helicase family protein
2.64575 Ahg475318 pyruvate dehydrogenase complex E1 alpha subunit
3 Ahg477055 vacuolar ATP synthase subunit A
3.4641 Ahg332329 ABC transporter family protein
5.19615 Ahg323893 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
5.56776 Ahg487711 ATP synthase alpha/beta family protein
7.4162 Ahg490589 Transmembrane amino acid transporter family protein
9.48683 Ahg494670 Lactate/malate dehydrogenase family protein
10 Ahg478590 retinoblastoma-related 1
10 Ahg483579 cytochrome c oxidase 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression