Detail



ID : Ahg920567

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920567|scaffold_101848.1
Sequence
TACAAGGTTC TTCCGCATCC ATGGATCTTA AGCAGATTGG AAATAATTCT ACAGGTGTCT TTGATGCATC TCAATATGAC TTTTTTGGGA GCCATGTTGT TGAGGAGGTC GAGTTTGGTG GATTGGAAGA TGAAGACGAA GAAGAATTAC CTGTCGCTGG AATAGAAGAA GACTTTGCCT TTGATAAGGA CGAGGTTCAT GTTTCTAGAA CTCTGTCCGA CGCTGATGAT CTTGCTACTA CTTTTTCAAA GTTGAATAGG GATCCTGAAG GATATAGGAG CACGGTACCT ATAGCTGGTA TTGGATCAAG ACAGTATTAT GTTGGTGATG GGTGGAACCA TGGAGAGGAG TTGCCAAATT GGTATGGCCA GCAGAAACTA GACTCTGAGG CGATCCAAGA TGACAAAAGG AGGCCGTCAC AGCCTTTTCC TACTCCGAAT CTTGTTGAGC AAAGAAACTT GCACAGAGCA ACATCATATC CTGAACCACA GCATCAACCG CGCCCATACC CGCATCAGCA ACAATTTTCC AGTGAACCGA TTCTTGTACC AGATCAGCAT TTTGGACAAC CAAATACACA ATTTCATTCT GATGGGTCTC ATATCGGATC GCCAAATCTC TCTCCATTTC CAAGTTCTCA TCCTCAGTTG GTTGGCACGC ATGGGTCACC GCAAATCACT GGAAACATGC CACAGTTTCG ACCTTCTCTT CCTGGGAACA ATCGCCCCCC AGCTCAATGG ATGAATGGCC AAAATATGTT TCCTGGAGAT AGTTCTGGGA TCATGAACAA CATGTTACCA CAACAGCAGT TACCTCATCA AAACGGTCTA ATGCCTCAAC AGCAGCGGAT GCCTCAGATG CAGGTTCCTC AGAATAGGTT AGTACATCCG ATGCAGCCCC ACGGGCATTT GTCAGGAATG CAGCCTCAAC TATTTAATTC CAACCTTTCT CGGTCAGCAT CCTCGGGCAG TTATGATGCA ATGCTTGGGT TTGGTGATCT GAGGGAAGCA AGACCAGGAT CGAGTCATGG GAACAGACAA AACATGCGCT TTCTTCAACA GGGTTTTGAT GGTGGACTTC AGAGGAGAAA TAATGCATGG CCTCCTTTCC GGTCGAAATA TATGACAGCT GTTGAAATAG AGAACATCCT AAGAATGCAA CTTGTGGCTA CCCATAGCAA TGATCCTTAT GTAGATGATT ATTACCACCA GGCATGTCTT GCTAAGAAAT CTGCTGGTGC AAAACTGAAG CATCATTTCT GTCCAAATCA TTTGAGAGAC CTTCCATCTC GTGCCCGTCC TAACAATGAG CCCCACGCAT TTCTTCAGGT TGATGCTCTT GGTAGAGTTC CTTTCTCTTC GATCCGCAGG CCTCGGCCTC TGCTTGAAAT GGATCCTCCA AATTCAACAA AATCTGGTAA TCTAGAGCAG AAAGATACAG ACAAGCCCCT TGAACAAGAG CCAATGCTTG CAGCTAGGGT GATTATTGAG GAAGGTCTAT ACCTCTTCCT TGAGGTAGAT GATATTGACC GGTTCTTAGA GTTCAATAAA CTCCAAGATG GTGGAAACCA GTTGAGGCAA AAGCGGCAAG CTCTGTTGGA TGGGCTTGCA GTGTCACTGC AGCTTGTTGA CCCACTTGGT AAGAACGGGC AAAACAGTGG GCTTGCATTT CAGGATCTTG TCTTTCTAAG AATTACCTCC CTTCGAAAGG GCCGGAAGCT ACTTACAAGG TACCTCCAGC TTCTTTTCCC TGGCAGCGAT CCAATGCGAA TTGTTTGCAT GGCTATTTTT AGACACTTAA GGTCTTTGTT TGGAGTGCGA TCATCAGATA CTGAAACCAC AAAAACCACA ATCAAACTTG CAAAAGTTGT CGCTTTATGC ATTCAGACCA TGGATCTTGG ACCCGTAAGC CTGTGTCTAG CAGCAGTTTC TTGTTCTTCT GAGCAGCCAC CGCTTCGTCC TTTGGGTAGT CCTGTCGGAG ACGAAGCTAC CATTATACTC AAATCTGCAC TCGATAGAGC TACCGAGCTT CTCCGTGCTA ATAATTACAA CAACTCAGGC ATGAATCTGT GGCGTGCTTC CTTTGATGAG TTCTTCAACT TACTGATGAA ACACTGCATA AGCAAGTACG ACAGTATAAT GCAGAACCTG AATTCGCAAT TGCCACCACA CTTTGCCACA GAGATATCTG AAGCTGCTGC ACAAGCCATT GTCAGGGAAA TGCCTATCGA GCTTCTACGA GCGAGTTTCC CGCACATAAG CGATGAGCAA AAGAGAATAC TTGTGGAATT CTTGAAGCTT GGTAGCCAGA AAACCGAATC AGTCATAGCT TGATGATATT CGATAAAAAC TTA 
Length2353
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6644721.. 6647698
Download Sequence
A.thaliana
AGI-codeAT1G79090.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg471419 phosphoenolpyruvate carboxylase-related kinase 2
4.24264 Ahg487696 GC-rich sequence DNA-binding factor-like protein
5.47723 Ahg333455 nitroreductase family protein
13.5647 Ahg480003 Homeodomain-like superfamily protein
15.6525 Ahg315769 ARM repeat superfamily protein
18.8149 Ahg479443 fucosyltransferase 11
28.3019 Ahg495435 conserved peptide upstream open reading frame 50
28.6356 Ahg490141 Concanavalin A-like lectin protein kinase family protein
31.0805 Ahg906729 trehalose phosphatase/synthase 11
31.4325 Ahg486820 TIC-like
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression