Detail



ID : Ahg921000

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921000|scaffold_102281.1
Sequence
TCGACCAGTT AGTGGTGAAA ATGGAGAATC AGGAGCCGGA AATCGAGAAA TTGCCTCAAG ACGATGTTCC TGATCGAGAA CCAGACCAGA AGAAGCTCAA GATTTCAACT ACCGGCCAGG AAACTGATTC CTCGGCTGTT ACCGCCGGCG GAAGCAACGT CGCTGAGCGT AGACCGCCGA AATACAGACG CCGGAAAGTC GCAATCATGT TTGCGTTTTG CGGAGTAGGC TATCAGGGAA TGCAAAAGAA TCCCGGCGCC AAAACCATTG AAGGCGAGCT CGAAGAAGCG TTGTTCCATG CCGGAGCCGT ACCTGAGGCT GATCGGAACA AACCAAGAAA TTACGAATGG GCACGATCCG CCCGTACCGA TAAAGGAGTG AGTGCGGTGG GACAAGTGGT TTCTGGTCGT TTTTATGTTG ATCCGCCTGG ATTTGTGGAG CGTCTCAATT CGAAGCTCCC TGATCAGATT CGTGTGTTTG GATACAAGCG TGTTGCGCCG TCGTTTAGCT CCAAGAAATT ATGTGATCGG AGGAGGTATG TGTATCTAAT TCCAGTTTTT GCTCTGGATC CATGCGTACA TAGTGAAGCT GAGATGGTTA GAACGGATTT AGGTTACGAA TATGTCAAAT GTGTTGAGTG CTCTGAGAAA GGCTACAAGA TTCCAGTTGG TGTTATGGGT AAAGACACTG ATTGTGATAC AAAATCATTG GAGATTCAGT CAGACATTTC GTCGAGCAAC TTTGATGCAT TAGGAACTGA TGTCAAGTGT GAAACTTTGA GCTCTAGTGT ACCTAATGTA GAAAGTAACT TAAACTCAGA AGTTCTAGAT GGGGCTGATG TATCTGCTAC GACCGAGAAA ACCCCTGATT CAAGCTCTAA AGCACATGAT ATGGAAGAAT CGAATTTGGA TTCTTCGAAA GAATCGAATA CTTTGGCTAA GGTAGAGATG AACAATGGGG GAGGAGGAGA CATGACAGAG AGCAAGTTCT GTTATGGAGA GAAGGAAATG GAGAGGTTTA ACAGAATTCT AAGCTGTTAT GTTGGTTCAC ATAACTTCCA CAACTTCACC ACCAGAACAA AAGCAGCAGA CCCAGCTGCG AATCGCTACA TTCTCTCTTT CAACGCAAAC ACAGTGATTA ATCTCGATGG AAAAGATTTT ATCAAGTGTG AAGTTGTTGG ACAGAGCTTC ATGCTTCATC AAATCCGGAA AATGATTGGA CTTGCTGTTG CAGTCATGAG GAACTATGCA CCTGAATCAC TGATCGAAAC TGCTTTCAAG AAGGATGTGA GAATAAATGT ACCGATGGCG CCAGAAGTTG GATTATACCT TGATGAATGC TTCTTCACGT CTTACAACAA AAGGTTTAAA GGCAGTCATG AGGAGGTGTC AATGGAAGAG TACAAGGAAG TAGCTGAAGA ATTCAAATGG AAGCATGTTT ACTCACATAT TGGCTCAGCT GAAGAAAAAG ATGGAGCTGT GGCTATTTGG TTGCATTCTC TGAACCAGAG AAACTATCCT GATCTACGAT GCAATGAATA CAAACCGGAT GAAGTCATTG TCTATAAGAA GATTGGTGAA GCCTCTGAAG AAAATATCCA TGAAGAGAAA ATTACAGTGA AAGAGAACAC TAATGGCACT GCAGAGCTAT TCGTTGCCGA TAAGGTGAAT GATGAAACCT CTGAAGGAAC AATTATGGAA GAGAGGACTA CACTAGACGA GAAGGCAACG GAATGAAGCC GCTTTTTATC TACTGCG 
Length1757
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8282923.. 8298951
Download Sequence
A.thaliana
AGI-codeAT1G20370.1
DescriptionPseudouridine synthase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg497488 eukaryotic translation initiation factor 2
8.48528 Ahg470277 peroxin 6
21.0238 Ahg488188 IKI3 family protein
21.095 Ahg341449 varicose-related
25.04 Ahg481646 sec23/sec24 transport family protein
27.5681 Ahg329184 MA3 domain-containing protein
30.5123 Ahg912263 RNA-processing, Lsm domain
32.9242 Ahg471269 S-locus lectin protein kinase family protein
34.2491 Ahg907940 ARM repeat superfamily protein
34.2491 Ahg484854 clone eighty-four
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression