| Annotation |
|---|
| Description | jgi|Araly1|922127|scaffold_103408.1 |
| Sequence |
TTTGCTTTAG TGAAGATACA AAAATGGCGG TGACGATTTC GACGAATACT TTCGTAAATG CATCTTTTTT AGATGAAAGT CGGAATTTTT TCTGGAAACC ATTGTTCCCT CAGCCTTCCT ATAACTGCCG ACGAGTCGTT CGTCTGAATT CGAGGAAATC GAAGACTAAG GTAATGTTCT GCTTGAATTT GAACACGAAG GAGGTTGGGA TGCAAACGTC GGGTGATAAA GGTTTTGAAT TCAAACCCAG TTTTGATCAG TACTTGCAAA TCATGGAATC GGTTAAAACA GCGAGGAAGA AGAAGAAATT CGACAGATTT AAAGTTGAGG ATGATGATGG TGGAGTTGGA AATAGTGATA GTGTTGATTC GGAAGTGAAA GACGGTGTTT CCTCGAGGCG ATTAGAATTG GATAGAGATG TGAAGATTAA GAGTGGTGAG GCAAAGGATG AAAGTTTCAG GAGGAGATAC ACAAGGCAGG AGATTGTAAG TGATAAACGT AATGTGAGAG GTTTCAATAG GAGTGAAGAA ATTGGAATTC AGAGAATAAA CAAAGATGTG AAATGGAGTA AGAGTGGTGA GTCTTCAGTG ACTGTGCAAG AAGATGAGAG CTTTAGGAGA AGGTACTCGA AGCAGGAGCA TCACCGTTCC TCTGAAACAT CGAGAGGTTC CACAGTTGAT GAATTGGATC TTGTTGTTGA AGAAAGGAGA TTTCCCAGAA TAGCCAAAGA TGCAAGATGG AGTAAGAGTG GTGAATCTTT AGTGACTTTG TCAGAATATG AGAGTTTCAG GAGACGGAAT CCCAAGCAGG AGATGGTGAG GTATCAGCGT GCCTCTGACA CACCGAGAGG GATTGAGAGA GGTTCCAAAG GAAATGGATT GGATCTCCTT GCTGAAGAAA GGCGAATTGA GAGATTAGCC AACGAGAGGC ATGAGATAAG AAGTAGCAAA TTGAGTGGAA CCGGGAGAAT TGGTGCTAAG AGAAATGATG ATGATGATGA TAGCTTGTTT GCCATGGAAA CTCCTGCCTT TAGGTTTTCC GATGAGTCCA GTGACATAGT GGACAAGCCA GCTACTTCAC GAGTCGAAAT GGAAGATAGA ATCGAAAAGT TAGCAAAAGT GTTGAATGGT GCAGACATCA ATATGCCTGA GTGGCAGTTT TCCAAGGCGA TCCGAAGTGC AAAAATCAGA TACACAGATT ACACTGTAAT GAGACTGATC CACTTTCTAG GGAAACTAGG AAACTGGAGA CGAGTTCTTC AAGTCATCGA GTGGCTTCAA AGGCAAGACC GTTACAAATC GAACAAGCTA AGAATCATCT ATACAACTGC ACTAAACGTT CTTGGTAAAT CAAGGAGGCC TGTGGAAGCC CTCAATGTAT TCCACGCTAT GCTGTTACAA ATTTCATCAT ATCCGGATAT GGTAGCATAC CGTTCAATTG CAGTCACACT TGGACAAGCT GGGCATATCA AGGAACTCTT CCATGTGATT GATACAATGC GATCTCCACC TAAAAAGAAG TTCAAGCCAA CAACACTTGA AAAATGGGAT CCCCGGCTTG AACCAGATGT TGTTGTTTAT AATGCGGTGC TCAACGCATG TGTTCAACGA AAGCAATGGG AAGGAGCATT CTGGGTATTG CAACAGTTGA AGCAACGTGG GCAAAAACCT TCTCCTGTAA CCTATGGTCT TGTCATGGAG GTGATGTTAG CATGTGAGAA GTACAATTTA GTTCATGAAT TCTTCAGGAA GATGCAGAAA TCTTCTATCC CTAATGCTCT AGCATATAGA GTTCTTGTTA ATACTCTATG GAAAGAAGGT AAAAGCGATG AGGCCATACA TACGGTTGAG GATATGGAAA GCCGTGGTAT TGTTGGATCA GCTGCTCTTT ACTACGACCT TGCTCGCTGT CTTTGTAGCG CAGGAAGGTG TAATGAAGGT CTCAATATGG CTGATCTTGA TCATACCATC CAATGTCAGC TTAATAAGAT ATGTAGAGTT GCAAATAAAC CTCTCGTGGT GACTTACACT GGCCTGATCC AAGCATGCCT CGACTCGGGA AACATCAAGA ATGCAGCTTA CATCTTCGAT CACATGAAGA AGGTCTGCAG CCCGAACTTG GTCACTTGTA ACATAATGTT AAAAGCTTAT CTACAAGGTG GGTTCTTTGA AGAAGCAAGG GAACTTTTCC AGAAGATGTC AGAAGACGGA AATCATATAA AAATCAGCTC GGATTTCGAA TCAAGAGTAT TGCCAGACAC GTACACGTTT AACACGATGC TAGACGAGTG TGCTGAACAA AAAAAGTGGG ATGATTTTGG TTATGCGTAT CGGGAGATGT TGCGTCATGG ATACCATTTC AATGCGAAAC GGCATCTCAG AATGGTACTT GAAGCTAGCA GAGCAGGAAA GGAGGAAGTG ATGGAAGCGA CATGGGAACA CATGAGACGA AGTAATAGAA TTCCGCCAGC GCCTCTAATC AAAGAAAGAT TCTTCAGGAA ACTCGAGAAA GGCGATCATA TTTCGGCTAT CTCGTCTCTT GCTGATCTTG ATGGAAAAAT TGAGGAGACC GAGTTACGAG CATTTTCGAC TTCCGCATGG TCCAGGGTCT TGTCCCGATT CGAGCAAGAT TCGGTTTTGA GGTTAATGGA CGATGTGAAG AGACGCGTGG GTTCAAGAAA TGAGTCTTCG GATTCGGTTT TGGGGAATCT ATTGAGTTCT TGTAAAGAGT TTCTGAAGAA CAGAACACAA GGCGTTGTAA GTTAATTATT GCGAATCTAA AGTTA |
| Length | 2785 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 13064300.. 13067929 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G30610.1 |
| Description | pentatricopeptide (PPR) repeat-containing protein |
| TAIR curator summary | Mutations in this locus result in embryo lethality. Embryo shape at seed maturity is globular. |
| Alias | [EMB2279][EMB88][EMBRYO DEFECTIVE 2279][EMBRYO DEFECTIVE 88] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.07107 |
Ahg925966 | Proteasome maturation factor UMP1 |
| 9.48683 |
Ahg495887 | MIF4G domain-containing protein / MA3 domain-containing protein |
| 9.79796 |
Ahg478735 | Lysyl-tRNA synthetase, class II |
| 11.6619 |
Ahg930087 | RNA methyltransferase family protein |
| 12.49 |
Ahg489194 | Nucleotidylyl transferase superfamily protein |
| 13.0767 |
Ahg943476 | translocon at the outer envelope membrane of chloroplasts 159 |
| 15.6844 |
Ahg476572 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| 15.9687 |
Ahg477786 | ARM repeat superfamily protein |
| 16.9115 |
Ahg918924 | importin alpha isoform 6 |
| 16.9706 |
Ahg488271 | Pentatricopeptide repeat (PPR-like) superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|