Detail



ID : Ahg924165

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924165|scaffold_105446.1
Sequence
TTGGCTTTAG TAATCGTCGT CCATGAGTTC CAATACGGCG TCGTCCAGCG CGGGGGCAGC CGGATCGGGA GATTCTTCCG CCGCCAGGAA GAATTCGAAG CGACCCAAGT ATTCGAAGTT CACACAGCAG GAGCTTCCAG CTTGCAAGCC AATTCTCACC CCTGGTTGGG TCATTTCGAC ATTTTTGATA GTCAGTGTTA TCTTTATTCC CCTTGGAGTT ATCTCTCTTT TCGCTTCCCA GGATGTTGTG GAGATCGTTG ACCGGTATGA TACTGAATGC ATTCCGGAAC CTGCTAGGAC TAACAAGATT GCATATATTC AAGGAGATGG AGATAAAGTT TGTACCCGGG ATCTTAAAGT GACAAAGCGT ATGAAACAGC CTGTCTATGT TTATTACCAG CTTGAGAACT TCTACCAGAA TCACCGAAGG TATGTAAAAA GCCGAAGTGA TTCACAGTTG AGAAGTCCAA AATACGAGAA TCAAATAAGC GCATGCAAGC CTGAGGATGA TGTTGGTGGG CAGCCGATTG TGCCGTGTGG TCTAATTGCT TGGAGTCTCT TTAATGACAC ATACGCCTTA TCAAGAAACA ATGTAAGCCT AGCTGTAAAC AAAAAAGGCA TTGCATGGAA GAGTGACAAG GAACACAAGT TTGGGAACAA GGTCTTCCCC AAGAATTTTC AAAAGGGGAA TATCACAGGT GGTGCTACTT TAGATCCAAA AATACCGCTT AGTGAACAAG AAGATCTCAT CGTGTGGATG AGAACCGCAG CATTGCCAAC ATTTAGAAAA CTTTACGGAA AGATAGAGTC TGACCTCGAG ATGGGTGACA CCATACACGT TACGCTGAAG AACAACTACA ACACTTACAG TTTCAATGGG AAGAAGAAGC TTGTTTTGTC AACCACTAGT TGGCTGGGTG GGAAGAATGA TTTCCTCGGC ATTGCTTACC TGACAGTTGG CGGGATCTGT TTCTTTTTGG CCCTCGCATT TACCATCATG TACCTTGTGA AACCCAGGCG ACTTGGAGAT CCATCCTACT TGTCATGGAA TAGAAATCCC GGAGGTCGGT AACAAGCTTG GAGAGGGAGC TC 
Length1092
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28304503.. 28306593
Download Sequence
A.thaliana
AGI-codeAT1G54320.1
DescriptionLEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg495912 SNARE-like superfamily protein
3.31662 Ahg491854 regulatory particle AAA-ATPase 2A
7.2111 Ahg477059 vacuolar H+-pyrophosphatase 2
7.48331 Ahg495534 Uncharacterised conserved protein (UCP012943)
7.74597 Ahg923954 related to AP2 12
8.12404 Ahg937750
9 Ahg475161 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
10.0995 Ahg487662 Succinyl-CoA ligase, alpha subunit
10.9545 Ahg340908 glucan synthase-like 10
11.4891 Ahg472374 Target of Myb protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression