Detail



ID : Ahg925505

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925505|scaffold_201066.1
Sequence
TTTAACATAT TTTTTTTATT ATGAGAACAA ATCCTACTAC TTCGGATCCA GAGGTTTCGA TACGTGAAAA AAAAAACCTG GGACGTATCG CTCAAATCAT TGGTCCGGTA CTGGATGTAG CCTTTCCCCC GGGCAAAATG CCTAATATTT ACAATGCTCT GGTGGTTAAG GGTCGAGATA CTCTTGGTCA AGAAATTAAT GTGACTTGTG AAGTACAGCA ATTATTAGGA AATAATCGAG TTAGAGATGT AGCTATGAGT GCGACAGAGG GTTTAAAGAG AGGAATGGAC GTGGTTGATA TGGGAAATCC TCTAAGTGTT CCAGTCGGCG GAGCGACTCT AGGACGAATT TTCAACGTGC TTGGGGAACC CGTTGATAAT TTAGGTCCTG TCGATACTCG CACAACATCT CCTATCCATA AATCCGCGCC TGCTTTTATA CAATTAGATA CAAAATTATC AATTTTTGAA ACAGGAATTA AAGTAGTAGA TCTTTTGGCC CCTTATCGTC GTGGGGGAAA AATTGGACTA TTCGGTGGGG CTGGCGTGGG TAAAACAGTA CTAATTATGG AATTGATCAA CAACATTGCT AAAGCTCATG GTGGTGTATC CGTATTTGGT GGAGTAGGCG AACGGACTCG TGAAGGAAAT GATCTTTACA TGGAAATGAA AGAATCTGGA GTCATTAATG AACAAAATCT TGCGGAATCC AAAGTGGCCC TAGTCTATGG TCAGATGAAT GAACCACCAG GAGCTCGTAT GAGAGTTGGT CTGACTGCCT TAACTATGGC AGAATATTTC CGAGATGTTA ATGAGCAAGA CGTACTTCTA TTTATCGACA ATATCTTCCG TTTCGTACAA GCAGGATCCG AGGTATCCGC CTTATTGGGT AGAATGCCTT CTGCTGTGGG TTATCAACCC ACCCTTAGTA CCGAAATGGG TACTTTACAA GAAAGAATTA CTTCTACAAA AAAGGGGTCC ATAACCTCTA TTCAAGCAGT TTATGTACCT GCAGATGATT TGACTGACCC CGCTCCTGCC ACCACATTTG CACATTTAGA TGCGACTACC GTACTATCAA GAGGATTAGC TGCCAAAGGT ATCTATCCAG CGGTAGATCC TTTAGATTCA ACGTCAACTA TGCTACAACC TCGAATCGTT GGCGAGGAAC ATTATGAAAC TGCGCAACAA GTAAAGCAAA CTTTACAACG TTACAAGGAG CTTCAGGACA TTATAGCTAT CCTGGGGTTG GACGAATTAT CCGAAGAGGA TCGCTTAACC GTAGCAAGAG CACGAAAAAT TGAGCGTTTC TTATCACAAC CCTTTTTCGT AGCAGAAGTA TTTACAGGTT CTCCGGGAAA ATATGTTGGT CTAGCGGAAA CAATTAGAGG GTTTAAATTG ATCCTTTCCG GAGAATTTGA TTCTCTTCCT GAACAGGCCT TTTACTTAGT GGGTAACATC GACGAAGCTA CTGTGAAGGC TACAAACTTA GAAATGGAGA AAGTAAAAGA AATCATTTTA TCTACTAATA GTGGACAAAT TGGTGTATTA CCGAACCACG CGCTGATTGC CACAGCTGTT GATATAGGTA TTTTGAAAAT ACGCCTTACT AACCAATGGT TAACGATGGC TCTGATGGGC GGTTTTGCTA GAATAGGCAA TAATGAAATA ACTATTTTAG TAAATGATGC AGAGAAGAAT AGTGACATTG ATCCACAAGA AGCTCAGCAA ACTCTTGAAA TAGCAGAAGC TAACTTGAGA AAAGCTGAAG GTAAGAGACA GACAATTGAG GCTAATCTAG CTCTCAGACG AGCTCGGACA CGAGTCGAGG CTCTCAATAC GATTTGATTT TGTAACTAGC TGACGTG 
Length1867
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8363443.. 8365374
Download Sequence
A.thaliana
AGI-codeATCG00480.1
DescriptionATP synthase subunit beta
TAIR curator summarychloroplast-encoded gene for beta subunit of ATP synthase
Alias[ATPB][PB][ATP synthase subunit beta]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg946681 ribosomal protein S19
7.54983 Ahg925495
8.12404 Ahg475565 ATP synthase epsilon chain
11.8322 Ahg475549 structural constituent of ribosome
13.4164 Ahg907853 ribosomal protein L2
19.4422 Ahg315521 Photosystem I, PsaA/PsaB protein
25.6905 Ahg933369 ribosomal protein L2
26.6833 Ahg907875 ATP synthase subunit beta
27.1662 Ahg925496 maturase K
34.0881 Ahg937101 ribosomal protein L33
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression