Detail



ID : Ahg925982

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925982|scaffold_201543.1
Sequence
TCCTCAAAGA CAAACAAGAT TATGTTACCC TCAAGAAAAA CTAAGAGAGT TCTCTCCGGT GACTTTACTC CGGGAAGAAA ACGCCGACGA TGTGTTGTTC CTTCTTCTGT TTCTCCGGCG CCGGAACACA CAACCGGAGC CGATTTGCTA GATTCAATTC CCGACGATCT TGTTGTCTCT ATACTTTGTA AACTTGGTTC TACTTCTCGA TGTCCTGCTG ATTTCATCAA CGTTTTGATG ACATGTAAGA GATTAAAAGG ATTAGCTATG GATCCTCTTG TCTTGTCGAG ATTATCTTCT AAAGCTATCG CTGTTAAAGC TCATAATTGG TCGGAATATT CTCACCGGTT CTTAAAACGG TGTGTCGACG CCGGAAGTCT TGAAGCTTGT TACACTCTAG GAATGATTCG GTTTTATTGT TTACAAAACA GAGGAAACGG CGCGTCGTTG ATGGCTAAAG CCGCGATTAG TTCTCACGCG CCGGCGTTGT ATTCTCTAGC GGTGATTCAG TTTAACGGAA GCGGTGGTTC AAAGAACGAT AAAGATCTTC GAGCCGGTGT TGCTTTATGT GCGCGTGCGG CTTTTCTTGG TCACGTAGAC GCGCTTCGTG AGCTTGGTCA CTGTCTTCAA GATGGTTATG GAGTTCCTCA AAACGTCTCT GAAGGTCGGA GGTTTCTTGT TCAAGCCAAC GCTCGTGAAC TCGCCGCCGT TTTATCTTCC GGTATCCAAG CTAGTTCAAC GTGGCTTTCT TTATCACAGC CACCTCCGGT TCCTAACCAT GGTCAGTCTT GTCCTTTACT TAGCGATTTT GGATGTAATG TACCGGCACC GGAAACACAT CCGGCGAATA GGTTTTTAGC GGATTGGTTT GCCGTACGCG GCGGAGATTG TCCCGGAGAT GGGTTGAGAT TATGTTCACA CGCTGGATGT GGACGACCGG AGACGAGGAA GCATGAGTTT AGGAGATGTT CGGTTTGTGG TGTTGTGAAT TATTGTTCAC GCGCTTGTCA AGCTTTAGAT TGGAAACTCC GGCATAAAAT GGATTGTGCT CCGGTGGAAC GATGGCTAGA GGAAGGTGAC GGTGGAGAAG GTAACGTTCA GATTGACGGA AATGGTAACG GTGATAATGT TTTGCTTCCA ATGAGTTAAC GGCAATGTAA CGGCTGCTTT 
Length1170
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11681834.. 11683185
Download Sequence
A.thaliana
AGI-codeAT1G67340.1
DescriptionHCP-like superfamily protein with MYND-type zinc finger
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg354720 Transcription factor TFIIE, alpha subunit
7.07107 Ahg484577 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
17.6635 Ahg475759 Arginyl-tRNA synthetase, class Ic
30.7409 Ahg320039 shikimate kinase 1
32.3265 Ahg487751 CD2-binding protein-related
45.4973 Ahg491117 tonoplast monosaccharide transporter2
46.4758 Ahg347136 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
47.244 Ahg487123
48.9898 Ahg948886 TBP-associated factor 4
50.6754 Ahg495993 phosphatidylinositol-speciwc phospholipase C4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression