| Annotation |
|---|
| Description | jgi|Araly1|926002|scaffold_201563.1 |
| Sequence |
CAAAGTCCCG GCGAAGCAGC CATGGCTGAT TCTCAGTCCG GTTCCAATGT TTTCAGTTTA CGGATTGTTT CAATAGATTA TTACATGGCT TCTCCTATCC CTGGTTATGA TATTTGCTAC AGTAGCTTCC AAGGTGGTGA GGTAAACGAA GTCCCTGTTA TAAGGATATA TGGCTCTACA CCTGCTGGTC AGAAGACTTG CCTGCACATT CATCGTGCTT TACCATATCT CTATATTCCA TGCTCGGAGA TTCCACCTGA GCATCATAAA GGAGCTGATG GAAGTACACT TGCTTTATCC CTTGAGTTAG AGAAGGCTCT AAAGCTTAAG GGCAATGCTG CTTCAAAAAG GCAACATGTC CATGATTGTG AGATTGTTAG AGCAAAGAAG TTTTATGGGT ACCACTCAAC TGAGGAGGCT TTTGTGAAGA TTTATCTGTA TCCTTGTAAT AGCTACCATC CACCCGATGT GGCTCGTGCT GCCAGTCTTC TTCTGGCAGG TGCTGTTCTT GGTAAAAGTT TGCAGCCTTA CGAGTCTCAT ATTCCTTTTA TTCTCCAGTT TCTGGTTGAT TATAATTTGT ATGGAATGTG TCATGTGCAT ATATCAAAGA TGAAGTTCCG TAGCCCAGTT CCTCACCATT TCCTTCCAAG GAGATTTGAT TTGGAAGATT GTGCGGGACA AAGGATTGAC GAAGTGGCTA TAACAAAGGC AAATTCAAGT GCTGCTGCAA GCGTCAGTTT TCCTGTTTGG AGCTTGTCAA CAATCCCAGG TCAATGGATG TGGAATATCT CAGAAGAATC TGATACACCG TTGAGCCAGA GCCAGCATAG GCACTATTAC AGACGTCAGA GTCTCTGTGA ACTTGAGGGA GATGCTACTA TTACTGATAT TCTCAATCAA CAGTTTAAAA TGTACAACTC CCTTTCACAA GCCCAGTCTG ATACTAACAT GGTTCAGTCG CTTGTGACAA TTTGGGAGGA GGAATATGAA AGGACTGGCG TGCATGATGC ACCTATACCT CCTGATCCTG GCAAACCATC TGCAGCAGAT GTGTTGAAGA CTATGTCAGA TTATGTTGGG TTTGAGAATA TGCTTAAAGA AATGCATAAC GAAGTTGACT TGTCTCAGTC TGATATGAAG CCTACTGCAG TATCTTCAGC CGGTCCAGAT AGGCATGCCA AACCTGAAAT TAGTGATCTG CAGGTTTTGA ATCATATGGT TGGTACAAGC AGTAAGTTTC CTGCATCAGA ACAGCTTTCT CCACTTGGTG AGAGGAGTGG AGAAGCATCA ATGGAAAATG ATGAATATAT GAAAACACCC ACGGACAGAG ATACACCTGC TGAAATACAA GATGCTGAAG CCTTGGGTCT CTTTAAGTGG TTTGCCTCAT CCCAGGCTGC AGAGGACATA AACTCTGATG ATGAAATTCT CCGGGAAACT ATCCTTAGTC CTCTTTTGCC TTTAGCTTCC ATTAACAAGG TTCTTGAAAT GGCTAGTACA GATTATGTGA GCCAATCCCA AAAGGAATGT CAAGACATTC TTGATTCTCA GGAAGATCTA CCAGACTTCG GGAGTTCGAC AAAGAGAGCT TTACCTAGTA ATCCTGATAG CCAGAATCTT ATAACTTCAT CGGACAAACA ATCTCTTGAA ACAGAAGTCG CTAGTGATGT TCCAGATATC TCCACTTCAA ATGGCGCAAG CGAAAATTCA TTCCAGAGAT ACAGAAAGAG TGAAGTAATG GAGAATAAGA ACAGGAGCTA CTCTAAGAGC AACAAGCCTA GCAACTCAGT ATGGGGACCT TTACTTTTTA CACTGACCAA AAATCTTCAG AATGACTTTG ACAGTACAAA TACTAGTGAT AAACTTGGTT TAACAAAGAT TAATTCAGAC CACCCCATGA ATGAGACGAC AGACAAATAT AATGTTCCAG TCAAAGAACA TCAAGCAGAT GTTTGTAATT CGATTGACAG AAACGTTTTG GCTGGATTTT CTCTGCGGGA CTTGATGAGG AAAAAACGGT TATGCCATGG AGACTCGCCT GTTTCACAAC ATATGAAATT TAGAAAGGTC CTACCACAGT CTAGAGATTC ACCACACGGG GAAAAAAAGC AGTGCACCTT GAGATCTGAG GCCGAAAAAC AAGGTCCTGC TCTTTCTGCA GAATTTAGTG AAGTTGATTA TGGTGATGCT CCTTCAACTT TATCTCCTAT AGATGATGGA ACTTGTGAGT GTAATATATC CACTCAGATG ACTGAACTTC ATTCTGTTGG TAGATGTTCG GCTAAAGAGA CAGCATTTCA AAACAGTGAT GAAGTTGTAA GGAATTTTTC ATTTACCACT GTTTCACTTG GTAAGGATCC ACAAACTGTG GAATCAGGAA CATTAGTGTC TAGCAATAAA CTTCTTGGGA TTGAAATAGA TGATGTCCAA AAATCGGGGA GGGAGCAAGA GTCAACTGCC AATGAAATTG TTGAGACAGG AAGATTAATA TGCCTAACCT TAAGCAAGAA GCCTCCTTCT GTGGATTGCC TAAGTTCTGG ACTGCACGAT TCTGCACATT CTCACGATAT TCTTGCCCAA TTTCATCATG CCAGGGAAAA ACAGCATGAT GGATGTGAGG GGAATTCCAA GGACATCCCA TTTTTTCCCT TGGAGGACAC CGAAATCAAC AAGGATGGAA AGAAACACTT ATTCCAAGGA GCTTCCCTTG GTATTCCCTT GCATCATCTC AATGACGGCT CAAATCTTTA CCTACTGGCC CCTGCCTTGT CACCCCCTTC TGTGGATTCT GTTTTACAAT GGATAGCAGA AGACAAAGGA GACTATAATA TTGATTCAGA AAAACAACCA TTAGAAGATG ATCATATTGA TCGTGGGGCA AGTTTCACTG ATCTTGCTTC TGCATCTAAT GTGGTGTCTG TGTCTGAGCA CGTGCAGCAT CATAATAACG TTTTTGTGAA TTCAGAATCA AATACTTATA CAGAGTCTGA GATAGATCTG AAACGTAGAG GAACGTTTCT TAATCTTAAC TCTCAGATTT CCCAAGAGAT GTCTCAGATT TCAGGTCCTG ATGGGAAATC AGGGCCCACT CCCTTAAGTC AAATGGGATT CCGAGATCCT GCGAGCATGG GGGCTGGGCA ACAACTTACA GTGCTGAGTA TAGAGGTTCA TGCAGAGTCT AGAGGGGACC TGCGACCTGA TCCACGATTT GATTCTGTCA ATGTCATAGC TCTCGTCGTG CAGAATGACG ATAGTTTTGT AGCTGAAGTA TTTGTGCTTT TATTTAGTCC AGATAGCATT GATCAGAGAA ATGTTGATGG CCTATCTGGA TGCAAGTTTT CTGTATTCCT TAAAGAGAGG CAACTATTCA GTTATTTTAT TGAGACTTTA TGTAAATGGG ATCCAGATAT TCTTCTGGGA TGGGATATAC AGGGTGGATC CATTGGTTTT CTAGCTGAAA GGGCTGCCCA GCTTGGCATA AGATTTCTCA ATAATATATC TAGGACGCCA TCTCCGACCA CGAGAAACGA TTCAGATAAT AAGAGAAAGC TTGGTAAAAA TCTGCTGCCA GATCCTTTGG TAGCTGATCC TGCTCAAGTA GAAGAAGTGG TAATTGAGGA CGAGTGGGGC CGCACACATG CTAGTGGTGT TCATGTTGGA GGTAGAATTG TTCTCAATGC ATGGCGTTTG ATTCGCGGGG AAGTTAAACT CAACATGTAC ACAATTGAAG CTGTGTCGGA GGCTGTTTTG AGGCAGAAGA TTCCATCCAT CCCCTATAAA GTATTGACAG AATGGTTTTC AAGTGGTCCT GCGGGGGCAA GATATCGATG CATAGAATAT GTGGTTCGCC GAGCAAATTT GAACCTTGAG ATAATGAGTC AACTTGACAT GATAAATCGT ACGTCAGAAC TTGCTCGTGT TTTTGGCATA GACTTTTTCT CAGTTCTCTC CCGAGGTTCC CAATACAGAG TGGAATCTAT GCTTTTGAGA TTAGCACACA CACAAAATTA TCTTGCTATA TCTCCAGGAA ACCAACAGGT TGCTTCTCAG CCAGCTATGG AATGTGTACC TCTTGTGATG GAACCGGAAT CTGCCTTCTA CGATGATCCT GTTATTGTGT TGGATTTTCA ATCTCTTTAC CCTTCAATGA TTATAGCATA TAATCTGTGC TTTTCTACGT GTCTTGGAAA ACTTGCACAT TTGAAGATGA ACACCCTTGG GGTCAGCTCA TACTCTCTAG ACCTTGGTGT TCTTCAGGAT TTAAATCAAA TCCTGCAGAC CCCAAACAGT GTGATGTATG TGCCACCAGA GGTGCGCAGA GGAATTTTAC CAAGGCTGCT AGAGGAAATT CTATCTACAA GAATAATGGT GAAAAAAGCA ATGAAAAAGT TGACTCCTTC AGAAGCAGTT CTTCACCGGA TATTTAATGC AAGGCAGCTT GCTTTAAAGC TGATAGCAAA TGTTACTTAT GGCTATACTG CTGCTGGCTT CAGTGGTCGA ATGCCTTGTG CAGAGCTGGC AGATAGTATT GTCCAGTGTG GTCGTAGCAC ACTTGAGAAG GCTATTTCGT TTGTCAATGC CAATGATAGT TGGAACGCTA GAGTTGTATA TGGTGACACT GATAGTATGT TTGTCCTCCT CAAAGGACGA ACTGTAAAAG AAGCTTTTGT AGTCGGACAA GAGATTGCAT CTGCAATAAC TGAAATGAAT CCACACCCAG TCACTTTAAA GATGGAGAAA GTCTATCACC CTTGTTTCCT TCTTACGAAG AAGCGCTATG TTGGGTACAG TTATGAAAGT CCCGATCAGA ACGAGCCTAT ATTTGATGCA AAAGGTATTG AAACTGTTCG AAGAGACACT TGTGAAGCTG TTTCAAAAAC TATGGAGCAA TCGTTGAGAC TCTTTTTTGA GAAGAAGAGC ATCTCTAAGG TTAAGTCGTA CTTGTATAGA CAGTGGAAGC GGATACTATC AGGGAGAGTG TCTCTACAAG ATTTTGTCTT TGCAAAAGAA GTTCGGTTGG GGACTTATAG CACAAGAGAC TCTTCACTCC TTCCTCCAGC TGCTATTGTG GCAACCAAAT CAATGAGAAC AGACCCTCGG ACAGAGCCAC GCTATGCGGA ACGAGTGCCT TATGTTGTGA TCCATGGGGA GCCAGGAGCT CGACTTGTTG ATATGGTGGT GGACCCACTG GTTCTTTTGG ACATTGATAC ACCCTACCGA TTGAATGACT TATACTACAT CAACAAACAA ATTATACCGG CTTTGCAAAG GGTATTTGGA CTCCTGGGTG CAGACTTAAA CCAGTGGTTT TTGGAGATGC CCCGTCTCAC CAGAAGCTCC CTTGGTCAAC GTCCCTTAAG CTCTAAAAAC TCACACAAAA CGAGAATTGA TTATTTTTAT CTCTCGAAAC ATTGCATCTT GTGTGGGGAA GTTGTTCAAG AATCTGCTCA GCTATGCAAC CGGTGCCTCA AAAATAAAAG TGCTGCTGAT GCAACCATTG TTTGGAAGAC TTCAAAATTG GAGAGAGAGA TGCAACACCT AGCCACGATA TGCAGACACT GTGGTGGGGG AGACTGGGTG GTGCAATGCG GAGTGAAATG CAATTCCCTT GCTTGCTCAG TCTTTTACGA GAGACGGAAA GTTCAGAAAG AGCTTCGTGG CCTCTCCTCC ATTGCTACTG AGAGTGAGCT TTACCCTAAA TGCATGGCTG AGTGGTTCTA ACATATTCGG AAAATCAATT C |
| Length | 5741 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 11772158.. 11781676 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G67500.2 |
| Description | recovery protein 3 |
| TAIR curator summary | Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). |
| Alias | [ATREV3][REV3][recovery protein 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.88819 |
Ahg928710 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein |
| 11.5758 |
Ahg478246 | DHHC-type zinc finger family protein |
| 16.9706 |
Ahg943082 | cell cycle switch protein 52 A2 |
| 18.6011 |
Ahg314107 | |
| 24.5967 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
| 25.2587 |
Ahg945493 | pumilio 6 |
| 32 |
Ahg473467 | RING/FYVE/PHD zinc finger superfamily protein |
| 33.2265 |
Ahg481235 | nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding |
| 34.8568 |
Ahg496588 | DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases |
| 35.0714 |
Ahg481627 | Coiled-coil domain-containing protein 55 (DUF2040) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|