Detail



ID : Ahg926406

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926406|scaffold_201967.1
Sequence
AGCTTTCTTC ATCGTCGTCC ATGGCGGCTA ACAAATTCGC GACACTGATT CACCGGAAAA CAAACCGAAT CACTCTAATT CTCGTATACG CTTTCCTCGA ATGGTCACTC ATCTTCTTCA TTCTTCTCAA CTCTCTCTTC TCATATTTCA TCCTCAGATT CGCTGATTAT TTCGGTCTTA AACGTCCTTG TCTCTTCTGC TCTAGACTCG ATCGTTTCTT CGATGCTTCT GGTAAATCTC CTTCTCATAA AGATCTTCTC TGCGATGATC ATGCTCTCGA GATTTCAAAA TCACATTCAA AACCTGTTGA AGAATCTCAC AATGAATTGG TTCATCATCG TCGTTGTTGT TGCGTAGAGA AGATAAGTTC TTCACTATTT TGTTGTGCTC CGATAATTGA GTCTGATTTT GGGGATTTAG GTTATCCGAT TGGTGATGAA GGTCAAATTT ACAATGGTCT TAAGTTTCCT CGATCGATCT TCGGATCCGT GAATTTGAAT GATTCTCAGG AAGAAGAAAC AGAGGAGAAG AAGGTTTCTT CATTAATCGA AATTGTTCCC CAATCTCCTG AGAAACTTGA AGAAGAAGAT GATGATGATG ATGAGGAGGA GGAGGAGTTT TCGTGCTATG TATCAAGTTT CGACTGTAAT AGCAAAGAAA TTGCAGCAGA GAAGGAAGAA GACAACAAAG TGGATCTGGC TATAGAGGTT AAAACTGCAG AATCAGCGCC TAAAAACCTT GAGTTCTATA TTGATGAAGA AGACTGTCAT TTGATTCCAG TTGAATTCTA CAAACAGAGC GAAGAAGTTC GAGAGATTTC CGATGTTAAC GGAGATTTTA TACTCGATTT CGGCGTTGAG CCTGATTTCA CAGCGGCGGA GGAGGAGGGA ATCTCCGCCT TTGCTTCGCC GGATGATTCG AAACCGGACG ATGCGGGGAC GAATCTAGGT GCTTCGTCAG ATGATTTAGT GCAAATGCAA AACGACGACG AAGATACAGA CGACGCTGAG GTTTCTATAG GCACAGAAAT TCCTGATCAT GAGCAAATCG GAGAGATTCC TTCGCACCAA CTCATTCCTC ACGACGATGA CGATGATCAT GAGGAGGATA TGTTGGAGTT CAAAACAGTT ACGATTGAAA CCAGAATGCC CGTCTTAAAC GTCAACGAAG AGCGGATTTT AGAAACTCAA GGCTCGATGG AAAGCTCGCA TAGTCTACAT AACGCTATGT TTCACTTAGA GCGAAGAGTA TCCTTTGACG GTATTGAATG TCCTGAAGGA GTACTCACCG TGGATAAGTT GAAGTTGGAG TTACAAGAAG AGAGAAAAGC ACTTAACGCG TTATACGAGG AGCTGGAGGT AGAGAGGAGT GCGTCTGCGG TTGCTGCCAG TGAAACAATG GCGATGATCA ATAGGTTGCA TGAGGAGAAA GCTGCGATGC AGATGGAAGC GTTGCAGTAT CAGAGAATGA TGGAGGAGCA AGCTGAGTTT GATCAAGAAG CCTTGCAGTT GTTGAATGAG CTTATGGTGA ATCGAGAGAA GGAGAATGTT GAGCTAGAGA AGGAGCTAGA GGTGTATAGA AAGAGAATGG AGGAGTATGA AGCTAAAGAG AAAATGGGGA TGTTGAGGAG GAGAATCAGA GATTCCTCTG TTGATTCGTA TAGAAATAAT GGCGATTCAG ATGAGAATAA CAATGGAGAG TTACATCATA AGAATGTTGA AGGAGTTACG GATTGGAAAT ATATAGAGAA TGAGATGGAG AACACGCCGG TTGATGTTGT TCTTCGTCTT GATGAGTGTT TAGATGATTA TGACGGAGAG AGGCTTTCGA TTCTTGGGAG ATTGAAGTTT CTTGAAGAGA AACTCACAGA TCTCAATAAC GAAGAGGACG ACGAGGAGGA AGCTAAAACG TTTGAGAATA ATGGTAGCAT CAATGGAAAT GGGCATATTC ATGGCAAGGA AACAAACGGA AAGCACAGAG TCATCAAGTC AAAGAGACTA CTTCCCCTGT TTGATGCGGT CGATGGAGAG ATGGAAAACG GGTTAGATAA CGGAAACCAT CACGAAAACG GGTTTGATGA ATCAGAGAAT GGTGCGATTG TGACGATAGA AGAAGAAGTG GATGAGCTAT ACGAAAGGCT AGAAGCTCTA GAGGCAGATA GAGAGTTCTT GAGGCATTGT GTTGGTTCAT TGAAAAAAGG AGACAAAGGT GTACATCTCC TCCATGAGAT TCTACGACAT TTACGTGATC TAAGGAATAT CGATCTTATT CGCGTCAAAG AAAATGGAGA CATATGAGTG TTTTTGAGTT TTGCGTT 
Length2317
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13734469.. 13736908
Download Sequence
A.thaliana
AGI-codeAT1G70750.1
DescriptionProtein of unknown function, DUF593
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg495812 DNA ligase IV
1.41421 Ahg933499 pentatricopeptide (PPR) repeat-containing protein
6 Ahg482979
8.7178 Ahg491515 pantothenate kinase 2
8.94427 Ahg934680 binding;RNA binding
9.16515 Ahg482433 Glycolipid transfer protein (GLTP) family protein
14.4914 Ahg475653 LETM1-like protein
18.1659 Ahg354992 Pentatricopeptide repeat (PPR) superfamily protein
19.0788 Ahg491382 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
22.9783 Ahg494293 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression