Detail



ID : Ahg937974

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937974|scaffold_502165.1
Sequence
TTTTTTCGAA TTCTTGACTA ATCATGGACA ATCAACAGAA GCAACTCCAG CAAGGCGTGC CGGAGTTGGC TTCTTTGGCT GGTCGCGAAG AGAGTTCCGT CAGAGGGATC GATCTTATGA GAGTTGATCA ATGTGAAGAG ATCGGTGTTA AACAAGTTCC TGCTCTCTCT GTACCTGCCT TGTCGGTGGC TGGGACGGTT GCTGTACCTG TGTCCATTGA GCAAGAGGTT AAAGTTGTTG ATGAAGCTGC CCCTGTGAAA CGAAAACGGG GTCGTCCTCC GAGGGCACAG GCTAAGACGC CGTTGCATAT TCGGCCACCC CCACCGCCGC CGCGGAAGGA CGACAAGGAA GAAGATGTTT GCTTCATTTG CTTCGACGGT GGAGACCTCG TTCTCTGTGA TCGCCGGAAT TGCCCCAAGG CATACCATCC AGCTTGTATT AAGAGAGATG AGGCATTCTT CCGAACAACG GCTAAATGGA ATTGTGGTTG GCACATATGT GGTACATGCC AAAAGGCTTC CAGTTACATG TGTTATACAT GCACTTTTTC CGTTTGTAAG CGGTGCATTA AAGATGCCGA CTATGTGATT GTGAGAGGTA ACATGGGTCT TTGTGGCACA TGTATTAAGC CTATAATGCT GATTGAGAAT ATTGCTCAAG GAGATAATGA AGCAGTTAAG GTGGATTTTG ATGACAAGCT TAGTTGGGAA TATCTATTCA AGGTATATTG GCTTTGCCTG AAGGAAGATC TATCTCTAAC TGTCGATGAG CTTACTAAAG CAAATAATCC TTGGAAGGAG GTTCCTAACA CTGCTCCTAA CGTGGAGTCA CGAAATGATC ATACCAATAA CAGAGCTTTA GATGTAGCAG TGAATGGAAC AAAAAGAAGA AAGACCAGTG ATTCCCCCAC CTTACCCAAC AAGTTGGATG GCAAAAATTC AAATAATATC CTAAAGAAGG CTCCTAGAGA TACGAGCTGG GCAACAAAAG AACTCCTCGA GTTTGTGTCG TTCATGAAAA ATGGCGATAC ATCTGTTCTA TCTCAGTTTG ACGTGCAGGG TCTTCTGCTT GACTATATCA AGAAAAAAAA TCTTAGGGAT CCTCTTCAGA AGTCTCAAGT TCTTTGTGAC CTGATGCTTG TGAAGTTGTT TGGAAAACAG CGAGTGGGTC ACTTTGAAAT GCTTAAGCTT CTCGAGTCTC ACGTCCTTAT TCAAGAGAAA CCGAAAGGTG ATAAGACCAC GAATGGTGAA ACTACTCATG CCGTACCTAG CCAAATAGAG GAGGATAGTG TTCATGATCC AGCGGTCAGG GATAGAAGAC GTAAGATGCG CAGGAAAACT GATGGCAGAG TACAAAATGA AAATCTGGAT GCATATGCAG CCATTGATGT TCACAATATC AACCTGATTT ATTTGAGACG TAAATTTTTG GAGTCTCTAC TTGATGATAT CAACAAAGTT CACGAAAAGG TGGTAGGCAC AATTTTGAGA ATCAAGGTAT CTGGCAGCGA CCAGAAGGTG GATATTCACA GGCTTGTTCA AGTTGTAGGT ACAAGCAAGG CAACAGCATC CTACCAACTT GGCGCAAAGA CTACAGATGT TATGCTAGAA ATACTGAATT TAGACAAGAG AGAAGTCATC TCGATTGATC AATTATCAGA CCAGAATATC ACAGAGGATG AGTGCAAACG GCTGCGCCAG AGCATAAAAT GTGGCCTCAA TAAACGTTTG ACTGTGGGTG AGATCTTGAA GACAGCAGCA ACACTGCAAG CCATGAGAAC CAATGAGGCT CTGGAAGCTG AGATATTAAA GCTCAATCAT CTCCGTGATC GGGCCAAAAA GCTGGAGCTT CTAAAATCAC CTGAGGAACG TCAGCGGCTT CTGCAGGAAG TCCCAGAAGT TCATACAGAT CCAAGCATGG ATCCGAGTAA TGCATCATCA TCAGATGCAG GGTTGGGTAC AACAAAACAA GTTAATCACA TAAAGGCACA AAGTAAAGGT CCGCAGAATA AAGGGGCTAT CTTGAACAAC GTAGGAAATA ATGCGCAGAA AAAATATGAT GCACCAATTT TGCGAAGCAG AAATGTCGTG CATGCTGATA AAGATGATTG TTCTAAGGTC CACAACAACT CATCAAATAT CCAGGAAACT GGTAAAGATG ACGAGGAGAG TGAAATATGG CATTATCGAG ATCCAACAGG AAAGACCCAG GGACCGTTTT CTATGGTGCA GCTCCGTAGA TGGAAATCTA GTGGCCATTT TCCCCCTTAT CTTAGGATAT GGAGAGCGCA TGAGAACCAA GACGAGTCTG TGCTTCTGAC TGATGCTCTT GCTGGACGGT TTGATAAAGC AACTACTTTG CCAAGTTCTT CTTTGCTTCC CCAAGAACAA AAACCATTTC CGCACGATTC TGGCCGCACT GGCGTGGATG TGAACTGTCT TCAGAAGAAC CAGACGCCAG TTAACACCAG TGCAACCTCC TCTTCCTCCT CTACTGTCAC TGCCCATTCT AACGATCCTA AAGAGAAACA AGTTGTGGCT CTTGTAGTTT GCTCTGGAAA AGTCGAGGAT GGTAATTCTG TTTGTCCCCA GTCTCAAGTT AGTTGTCCGG CGTCAATGTC TGTGGTTCCT GGACACGTTG TTAGTCCTGA TGTAAGACAA ACTCCAGGAA CTGATCAATC CAATGCTGTG CGGGCAGATG GTAACCATAA CACAACTAAG ACTCTGGATG ATGGAACAAA TGGTGGTTCT GCCATAAATG GTTCTGTTCA GGCACCAAAC CTGAATCAAG AAAGCCATTT CCTTGATTTC CCTAGTCCTA CGCCTAAGTC GAGCCCTGAG GACTTGGAAG CTCAAGCGGC AGAGACTATT CAGTCTCTGT CTTCATGTGT TCTGGTCAAA GGACCATCTG GTGTCACTTG GAGCACCACA ACAACAGCTA CCACCGATGC TGCTACTACT ACTTCAAGTG TTGTGGTCGC TGGAGGACAG CTTCCTCAAG TAACTCAGCA GAATGCTGTT GTTTTAGCTG CACCGTCTGT AAAGCCAATT GATTTGGCAG CTGATCACGC CACAGCTACG CAGACTTCAG ACAACACCCA AGTGGCTCAA GCATCTGGGT GGCCGGCCAT TGTGGCTGAC CCTGACGAGT GTGATGAATC AGTTTCAGAT CTATTAGCTG AAGTTGAAGC AATGGAGCAG AACGGTCTTC CCTCTTCACC CACCTCAACG TTTCACTGCG ATGATGATGA TGATTTGACA AAAGGGCCAG AGAAAGATTT CTTTAACCCC GTGGCACGCA TGTCCCTGAC ACCTGAAACA TGTAGATTGG ATGTCTCTCA GGCGAGTATT CTCGACAATG TCTCTGCCGG GAAAAGCTCA ATGGGTACAG AAGCAAAAGA CAACACTCCC TTCGGCCACT TCGGAACCGC TGGTCCAGAG CTCCTGCTTT TTGCACCACC AGCGCCAGCG CCAACTTCAA TAAGTCACGA CCTGACTCTA ACGACAACGG CTCTCAGACT AGGATCAGAA ACCACAGTTG AAGCTGGATC GGTCGAGAGG CTCCCCAAAT CTGTTTTGGG AGTAAGTTCG GAACCAAGCC CTAGGTCATT TATATCTCAT GACTCAGGCT CAGCCCGTGG AAACACCGAG CGAAGTCCAC GAGGGAGCCA GCAGAAGAGA TCCAGCGGGC ACAGCAGAGA CCGGCAGTGG TTGAACAGCA GTCACAACAG TAGCTTCAAC AACAGTCATA ATAACCGTCA ATGGCCATAC AGCAATAGCC ATGGGTATGA CCATGGATCA GGTTCGTACG CAGCTCATCC GCCCAAAGGG CTGAAAATCT GTAAATTCTA TGAGAGTGGA TACTGCAAAA GAGGTGCATC TTGTAGTTTT TGGCACCCCT GAATTTTCAT TTCTTGTATT TT 
Length3922
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14667866.. 14673808
Download Sequence
A.thaliana
AGI-codeAT3G51120.1
DescriptionDNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg488829 Telomerase activating protein Est1
6 Ahg487210 kow domain-containing transcription factor 1
9.53939 Ahg928168 embryo defective 2016
10.7703 Ahg913127
13.1909 Ahg492801 tripeptidyl peptidase ii
16.7332 Ahg474065 actin 8
16.8819 Ahg935879 ENTH/ANTH/VHS superfamily protein
17.5499 Ahg488691 transcription regulator NOT2/NOT3/NOT5 family protein
18.0831 Ahg491431 ENTH/VHS/GAT family protein
19.4422 Ahg327070 cryptochrome 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression