Detail



ID : Ahg929584

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929584|scaffold_302041.1
Sequence
AAAAAAAAAA AAAAGAAACG CAATGTTCGT CGGCGACGAC GACTCAGTTC AGATTGTTCG GCTTCTTGAC CAGACGCTTA CTTCCATTGA TGGCGTTGCA GTCCGCGAGG CGACGGAGGC TCTGGATCGA CTTTCTACGG AGCTCCCTCA CTTCCCTTAT CGTCTTCTCT CCCTCGCTTC CGGAGGAGAA AATTCCAGCC TGAGAGTTGC TGCTGCAACA TATCTGAAGA ATTTTACCAG AAGGAGGACT GGGATTGAAG GGATAATCTC AGAAGCCAGC AAGGACTTTA AGGATCAGCT GCTCCTAGCT TTGCTTCAGG CAGAGCCTGC ACTTCTTAAA GTTTTACTTG AACTGCTCCA CATTGTTGTC ATTTCAGAAT ATGTGAAGAA AAATGCATGG CCTGAACTTG TACCGGAGCT CCGCTCTGCT ATCGAGAACA GTAGATTAAT TAGCAGTTCA GACTCTAGCT GGAGTACTGT GAACGCTCTG ATGGTATTGC TTACCGTTGT AAAGCCTTTT CAGTACTTCC TGCAACCAAA ACTTGCAAAG GAGCCAGTAC CACAACAGCT AGAGAGTATC ACGAAAGAAA TTCTAGTACC CTTGGTGTCA GTATTACATC GTCTCATTGA CAAGGCTTTG ACTACCCATG GATGGGATGA ACTGGAATTG GAAAAGACAC TCCACATTAT TTGCAAATGC CTATACTTTT CAGTGAAGTC TCATATGCCA TCTGCTTTGT CACCTCTGCT CGATTCCTTC TGTCGAGATA TGATCCGAAT TCTGGACTCC TTGAGTTTTG ACTGGAGTGT AACTCCTTCT GATGGGTACT TGATAAGGTC GAAAGCTGGA AAAAGAAGTT TGCTCCTCTT TGGCACACTC GTCAGCAGAC ATAGAAAATA CTCTGACAAA TTGGTGCCGG AGATAGTAAA CTGCTCAATG AAGATTGTCA AACATAGCTC AAACATCAGT AAGCTCGGAT GCCTAACTGA GAGAATTATA TCACTTGCTT TTGATGTAAT TTCACGCGTC ATGGAAATTG GCCCTGGATG GAGATTACTT TCACCCCATT TTTCCTTTTT GTTGGACTTC GCAATCTTTC CAGCCCTGGT GCTTAATGAG AGGGACATCT CTGAGTGGGA AGAAGATGCA GATGAATTCA TAAGGAAAAA CCTTCCATCT GAACTAGAAG AAATTTCTGG GTGGAGGGAT GACTTGTTTA CAGCCAGGAA AAGCGCTATG AACTTACTTG GTGTCCTTGC CATGTCAAAG GGACCACCAG TATCTACTAC AAATAAAGCT TCCTCAGCAT CATGTAAGCG GAAGAAAGGT GAAAAGAACA GAGGAAATAA CCAAAGATGC ATGGGAGATC TACTGGTGCT TCCATTTTTG TCAAAATTTT ATGTGCCTTC TAAGAGTAAC AAACTGGATG CTAGTACTTC AGCAGCCTAT TTCGGTGTCC TAATGGCATA TGGTAGCCTG GAAGAGTTTA TCCAAGAACA AAATCCTGAG TATGTGGCAT CTTTTGTCCG TACCCGTGTG CTACCGATTT ATTCTACACC TGATTGCTCA CCTTACTTGG TTGCATCTGC AAACTGGGTA CTTGGAGAGC TTGCGTCTTG CCTACCTGAG GAAATGAATG CAGATGTTTT TTCTTCCCTG CTGAAGGCAT TAGCAATGCC AGATCAGGTG GAGATTTCTT GTTACCCAGT GCGTTTTTCA GCTGCTGGTG GAATAGGTTC ACTGCTCGAA AATGAGTACC AACCACCTGA ATGGTTGCCG TTTCTTCAGA TTATTACTGG TAAGATTGGT AATGAGGAAG ACGAGGATAG CATGTTGTTT CAGCTTCTCA AATCCGTGGT CGAGTCGGGA AATCAAGATA TTGCCACGCA TATTCCGTAC ATTGTCTCTT CGCTAGTTAG TAATATGTTG AAGTTTATGC ATCCAAGTGA AGATCCATGG TCTCAGGCTA TTCTAGGTGG CCTTGAGACA TTAGTAGCGA TGGCTCAGAC TTATGAAAGC TCTAAGCCTG AAGCGGATGA GGAGAATAAT CAGGCGACTG AAATATGGCT AACTGGTCAA TGCACCATCA GCAAAGCTTT GTCAGCACTT TTACAGCACG CATGGCTGGC AACAGATGTT CCTCCGACTT CAAGCATAGA TCATTTGTCG ACGATGTTGC GGTTCATTGT GATTGCCTGC ACTAATTGCA ATGTATTTGT GGAGCTCAGA TTAAGTGAAT TACTCATAGT TTGGGCCGAT ATTCTTGCTA GTTGGAATGG TTGGGAAGAG TCGGAGGACT TATCGGTTTT TGACTGTATA GAAGAAGTTG TGGGTATAAA CAACAAATAT GGTTTTAGGA GTTTCCTTTT CAGAGATATG CCATCCCCTC CAGCCATGCC AGTCCGTCCG CGATCTGTTG TTGAATCCAT TGGTTCATTT GTCAGCAAAG CCATACTTGA GTATCCGTCG GCCACAAGGA GGGCTTGTTC TTGTGTCCAC ACATTATTAT ATGTACCCAA CTACTCATCT GACGTCGAAG GGGTGGGGAA ATCATTGGCG ATGGTCTTCA CTGAATCAGC CTTTTCTCAT TTTCTAGCAT TGCGTGAGAA ACCTTGTCCA TTGTGGAGGC CTCTATTATT GGCAATATCA TCATGCTATA TCTCCTATTC CGATATTGTG GAAGGCGTTT TAGAGAAAGT GATATCTGGA GGTTTCGAGT TATGGCTATC TTCATTGGCT TTTTCATACT CGCTTATGTG TGATGCCAGT CCATCAGTAG TATCGGAAGT AAAACTATAT GTGATGACGG TAGTAAAGGT GATCGAGCAT CTTTTAGATG TAAGGCACGG GAATGCAACT GATGATTTGG CAAGGAAGTG CTTTGTTTCA TTGATGGAGG CTTCTCGGAG GCTAAAGGAA GTGAACGAAG AAACAGACGA TGATGAAGAT GATGGAGAAC CCGGAGAAGA AGAGACAGAA TCTGAAGAAA CTGATTCAAA TGACGAGGAT TCCGAAAGCG ATGACGAGTG TGAAGAAACG GAGGAAGAGT TTCTAGAAAG GTATGCTAAA GCTGCAGCAG AATTGGAGGA TAGTGAAGTA ATTGAAGAGG CGGATGAAGA AGATGATGAC CATGAGATTG ATTTGGGTTC TCTGAATGAA ATCGATCCGC AGAAACTGGT GTTAACATTA ATGGAGAAGC ATCACGAGAA AGTAATAAAA CTCGTACCCT CTGAAGTAAT CTCAACCTTT CTCAATTCTT TTCCTGTATA CACAAGTCTC TTCTCTAAGT GCCTCTAAAC ATTAAACTAC AGTTTTCT 
Length3318
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6964111.. 6970891
Download Sequence
A.thaliana
AGI-codeAT3G17340.2
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.61577 Ahg487510 bZIP transcription factor family protein
25.6125 Ahg485847 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein
27.3496 Ahg492999 Pollen Ole e 1 allergen and extensin family protein
53.0566 Ahg914129 N-terminal-transmembrane-C2 domain type 5.1
57.4978 Ahg497127
63.6632 Ahg350409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
72.374 Ahg479567
79.975 Ahg940242 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein
84.6227 Ahg476906 beta-galactosidase 16
87.0747 Ahg939040 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression