Detail



ID : Ahg932220

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932220|scaffold_400208.1
Sequence
TTTCTTCAAA TCTCGTATCG ATATGGCGAA TCATGAAACG ATATTCGATC ATCTAAAGAA GCAGATACCA GTGGATGAAG AAGAATCTCT CAATTTGAAT CGAGACTCGA GCGTTGGTCT CGTCATCGTT GACGTTGTTA ATGGCTTCTG CACAATTGGC TCCGGCAATA TGGCTCCTAC AAAGCATAAT GAACAAATAT CGAAAATGGT GGAGGAAAGT GCAAAGCTTG CTAGAGAATT CTGTGATCGG GAATGGCCGG TTTTGGCCTT TATTGACTCT CATCATCCGG ATATTCCTGA GATACCTTAT CCTCCTCATT GTATTATAGG AACTGAAGAA TCAGAACTTG TTCCTGCTCT GAAATGGCTT GAAAGTGAGA ACTGTGCCAC TCTTAGACGA AAGGATTGTA TTGATGGGTT TGTGGGTTCG ATGGAGAAAG ATGGTTCTAA TGTTTTTGTG GATTGGGTTA AGGAAAAACA GATCAAAGTT ATTGTGGTTG TAGGTATCTG TACAGACATA TGTGTGTTTG ATTTTGTGGC TACTGCACTG TCTGCCCGAA ACCACGGTGT TCTTTCTCCT CTAGAAGACG TGGTAGTTTA CTCGCGTGGC TGCGCTACTT TTGACCTTCC TCTTCATGTT GCGAAAGATA TCAAAGGCGC TCAGGCTCAT CCTCAGGAGT TGATGCACCA TGTAGGTCTA TATATGGCTA AAGGAAGAGG AGCTAAGGTA GTCTCTAAAA TTTCTTTTGA GACTTGAAAG ACTATCTCGT TTATAAA 
Length777
Protein Sequence
Protein Residue
Map Locationscaffold_4: 987242.. 988529
Download Sequence
A.thaliana
AGI-codeAT2G22570.1
Descriptionnicotinamidase 1
TAIR curator summaryencodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.
Alias[ATNIC1][NIC1][A. THALIANA NICOTINAMIDASE 1][nicotinamidase 1]
Gene coexpression
MR
MR Locus Description
18.6815 Ahg935298 Small nuclear ribonucleoprotein family protein
29.95 Ahg484492 translocase of outer membrane 20 kDa subunit 3
31.1448 Ahg471082 Pseudouridine synthase family protein
32.187 Ahg490803 Ribosomal protein S5 domain 2-like superfamily protein
47.5815 Ahg487210 kow domain-containing transcription factor 1
49.5681 Ahg472287 Spc97 / Spc98 family of spindle pole body (SBP) component
58.1893 Ahg490126 sensitive to freezing 6
63.498 Ahg484485 actin related protein 2
65.3299 Ahg903840 Chaperone DnaJ-domain superfamily protein
70.1997 Ahg925691 Arginyl-tRNA synthetase, class Ic
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression