Detail



ID : Ahg933983

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933983|scaffold_401971.1
Sequence
TCCTCGCCGA AGACTTCAAG ATGTCTGATT CCGACATGGA CATTGATGAT GATGAGGTCG AACAAAAGGT GCAAGTACAT ACAATTGTAA GAGAATCTGA ATTGCTTGAT AAACCACCAA TTCAAGCTTC CAATTCCCAC AACGATGTGA AGAGGCATTC TGTAACAACA CCTTTAGATG AGCAATCAAA AATCATAAAG GAACAAGCTT TTGCTCAATA TAATGGTACT TTATCAAGAT TTCCTGCTCC GGGTATACCA CCAAAAAGCT TTTTCCCTGG CGGTGAAGGG AATGAACCAG AACAAAAACG TGCAGCTCTT CCCTGCAAGT TTTTTGCTAA AGGGTGGTGT TTCAACGGGG TGTCCTGCAA GTTTCTACAT GTGAAAGAGA ATTCAAATTG CATTAGTCAA CAACTGGCGG AAAATAGTAT GGCTGGAAAC GGTGGTATCC GGTCTGATCT AGAAAGAAGA ATTTCGGACA GCAAAGAAGG TGTAAGATTT TCCCAGTTAA GCGAAAACGG CATGACATCT TTGCATACCA GAAATGATAT ATCTTTCGTG AATCCCCCAG GTTCTCAGAG AGTTTTCTCC TCCATGTCTT TTGTGAATCC CCCAGGTTCT CAGAGAGTTT TCCCGTTCAG TAACGAGATG CGCTTTATGC CTTCATTTGA GAACATAGGA AGAGAAAGTT TGAAGCAAAC ATATGGTGAT GTCACTGACA ATAGGTCTCT AGTTATTAAT AACAGCAATT CCTTCACATT GAGAAGCAGC TTTGTTCATG AGCATAGACC TTCTATCAGT TCCTATCTAA AAACAGACAT GGGATCTTCT GGACCAGCCT GGACAGGATC ATTATCCAGT TCTGTTCCTA TGAAGGAGCG TGCTTCTACT GTGGGGCATT TTGAAAATGG GAATAATATA TCTGGATCAG GATCACTTCC AACGCTGCAA GGGATAGCTG TTTCTTCTGA TAAAGGCGCA GAAGGCAACA CTACTAGCAA TAAAAAGAAA GTTTCTTCAG ATGACTGGGA ACCTTCTGAA CCTTTTAAAG CATCTTTTAC AATTCCACCT TATATACTTC CCTCGTCTGA TGCCCTCTAC GATCCTTTCA CGGATATAGA GAATCTAGGA GGAGACAGAG CTCTTAATGC TTCATTGTCA AGTAAAGGAG AACATGCACG GAAAAATTCC CGCCAGCAAA AAGATGGTGA TTCTGCTAGT GGTCCCGAAG CACGGGAAAT TAAGAATGAT GATAAAAGCA GTTCATGCAG TCAAAACCAA CACCAAGAAA CTGTGACAAG GAGTTTGGAA GCACATGGAG TAGTGGAAGG GGTGGCTACT TCAGTGGTTG ATCAAAATGA TGCAACAACA CCTAGCAAAG AGATTTCTTC GGCTGCGGCT GCAGAGAACA GAGTTGTTTT GAAAAGAAGC AAACCTGCAG GGCATGATTC TTGGCATAGA AGTGATGGGT CTTCATATAA AAAGACAATG AAATCAGATG AGATAGATGG TGAAGTGAGG TCAGATGCAG GGATGAAAGT AATGAGACAA TTCCGGACTG CAGTTGTGGA AACCGTTAAA GAAATGTTGA AACCGTTGTG GCGTGAGGGC CGTCTTACCA AAGACGTGCA TAACATGATA GTTAAAAAAG CTGCAGAAAA GGTAGTCAGT GCCGCTGTCC AGTTCCATCA GGTACCAACT GACACCGAAT CAGTTGATCA ATATCTTGGT TTGTCTGCAA CCAGAATTGT GAAGCTTGTT GAGGGGTATG TCGAAAAGTA TGGTAAACCC TGAGTTATCA AACCAAATGT CACTT 
Length1815
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15226671.. 15228855
Download Sequence
A.thaliana
AGI-codeAT2G33835.1
DescriptionZinc finger C-x8-C-x5-C-x3-H type family protein
TAIR curator summaryEncodes a zinc finger domain containing protein that is expressed in the shoot/root apex and vasculature, and acts with FRI to repress flowering.FES1 mutants in a Col(FRI+) background will flower early under inductive conditions.
Alias[FES1][FRIGIDA-ESSENTIAL 1]
Gene coexpression
MR
MR Locus Description
16.5831 Ahg329829 Tetratricopeptide repeat (TPR)-like superfamily protein
21.4009 Ahg481833 pumilio 3
24.1868 Ahg489770 Drug/metabolite transporter superfamily protein
32.45 Ahg472789 BSD domain-containing protein
33.2866 Ahg492175 RING/U-box superfamily protein
49.1528 Ahg494346 disease resistance protein (TIR-NBS-LRR class) family
58.4294 Ahg490395 Ca2+ activated outward rectifying K+ channel 5
58.7367 Ahg345735 Prenyltransferase family protein
61.4003 Ahg496871 FAD-dependent oxidoreductase family protein
64.2651 Ahg931722 anaphase promoting complex 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression