| Annotation |
|---|
| Description | jgi|Araly1|938046|scaffold_502237.1 |
| Sequence |
TTCTCTCCTC CGTCGTTTCT ATGACTTCGA TTCTCAACAC CGTCTCCTCC ATCCATTCCT CCAGAGTTAC CTCCGTCGAC CGAGTCGGAT TTCTCTCTCT CCGGAATCCG GATTCCGTCG AGTTCACTCG CCGACGTTCT GGTTTCTCGA CGTTGATCTT CGAATCACCC GGGCGGAGAT TTGTTGTGCG TGCGGCGGAG ACTGATACTG ATAAAGTTAA ATCCCAGGCA CCGGACAAGG CACCAGCCGG TGGTTCAAGC ATTAACCAGC TTCTCGGTAT CAAAGGAGCA TCTCAAGAAA CTAATAAATG GAAGATTCGT CTTCAGCTTA CAAAGCCAGT CACCTGGCCT CCATTGGTTT GGGGAGTCGT CTGTGGTGCT GCTGCTTCAG GGAACTTTCA TTGGACCCCA GAGGATGTTG CTAAGTCGAT TCTTTGCATG ATGATGTCTG GCCCATGTCT TACTGGCTAT ACACAGACAA TCAACGACTG GTATGATCGA GATATTGACG CAATTAATGA GCCGTATCGA CCAATTCCAT CTGGAGCAAT ATCAGAGCAA GAGGTTATTA CACAAGTCTG GGTGCTGTTA TTGGGAGGTC TTGGAATTGC TGGAATATTA GATGTGTGGG CAGGGCATAC CACGCCCACT GTGTTCTATC TTGCTCTGGG AGGATCATTG CTATCTTATA TATACTCTGC TCCACCTCTT AAGCTAAAAC AAAATGGATG GGTTGGGAAT TTTGCACTTG GAGCAAGCTA CATCAGTTTG CCATGGTGGG CTGGCCAAGC ATTGTTTGGC ACTCTTACAC CAGACGTTGT TGTTCTAACA CTTTTGTACA GCATAGCTGG GTTAGGAATA GCCATTGTTA ATGACTTCAA AAGTGTTGAA GGAGACAGAG CATTAGGACT TCAGTCTCTC CCAGTAGCTT TTGGCACTGA AACTGCAAAA TGGATATGCG TTGGTGCTAT AGACGTTACT CAGCTCTCTG TTGCTGGATA TCTATTAGCA TCTGGCAAAC CTTATTATGC GTTGGCGTTG GTTGCTTTGA TCATTCCTCA GATTGTGTTC CAGTTTAAAT ACTTTCTCAA GGACCCTGTC AAATACGACG TCAAGTACCA GGCAAGCGCG CAGCCATTCT TGGTGCTCGG CATATTTGTA ACGGCATTAG CATCGCAACA CTGAAAAAGG CGTATGTTGA TGGAGTTT |
| Length | 1208 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 14937129.. 14940129 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G51820.1 |
| Description | UbiA prenyltransferase family protein |
| TAIR curator summary | Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP. |
| Alias | [ATG4][CHLG][G4][PDE325][PIGMENT DEFECTIVE 325] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.2111 |
Ahg475805 | ribulose bisphosphate carboxylase small chain 1A |
| 9.16515 |
Ahg939440 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 9.79796 |
Ahg486816 | chloroplast stem-loop binding protein of 41 kDa |
| 11.225 |
Ahg486548 | Transketolase |
| 11.6189 |
Ahg474606 | chaperonin 60 beta |
| 12.49 |
Ahg492365 | 31-kDa RNA binding protein |
| 18.4391 |
Ahg484431 | glyceraldehyde 3-phosphate dehydrogenase A subunit |
| 20.1742 |
Ahg946135 | RAB GTPase homolog E1B |
| 21.4942 |
Ahg348440 | chloroplast RNA-binding protein 29 |
| 21.9773 |
Ahg476582 | Pyridine nucleotide-disulphide oxidoreductase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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