Detail



ID : Ahg938241

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938241|scaffold_502432.1
Sequence
CAATTTCGCA AAGGTGGATC ATGGGCAATT TCATAAGCGG TGGTAGCCGC CCCCAATATC ACCGAGACCA TCAATCGCCG CCGCCTCCAA ACCCTAATCC TCAGTTCGAA GGCAATTATC CTTTGCCGTA CCACCACCAA CAAGATTGTG CTAGGTATCC TTATGGGGAG ATGGCGTCTC CGGTGCAATA CGTAGAGCAC CAGGAAGCAG TGACTATAAG GAACGACATC AATTTGAAGA AAGAAACCTT GAGATTTGAG CCTGATGAAC AAAACCCTGG CAAGTTTTTG CTCTCCTTCA CTTTTAACGC CTCTGTTCCT GGAAGCATCT CTGTGATGTT CTTTGCTAAA GAAGGCAAAG AGTGTAACTT TAATGCGACA AAGGAGGATC TGTTTCCATC CACGACTGTT AGTTTTGCAA AAGGTATGGA ACAGAGATTC AAGCAGGCTT GTGGAACAGG GATTGATTTC TCAGCTTTGT CAGGGACAGA TTTGGTTGAG GCAAGCGAGA CAGATGTTTA TCATGTGGCA GTGATAGCAG AGGTAGTATC AGAAGATGAT CATTCTGAGT CTGAGACACT AAACAGACAG ATAACTCATG TGGTTTTAGA GAAAGATCAT AAGGGTGAAT ACAAGGCGAG AGTGGTCAAG CAGATCCTGT GGGTGAATGG GAAAAGGTAT GTTCTTCAAG AGATTTATGG GATTGGTAGT ACAGTTGATG ATAATGGAGA AGATGCGAAC GAGAGAGGAA AAGAATGTGT CATCTGCTTA TCGGAGCCAC GAGACACTAC TGTTCTCCCA TGCAGGCACA TGTGTATGTG TAGCGGTTGT GCAAAGCTTT TGAGGTTTCA GACAAACCTC TGTCCCATCT GTAGACAACC GGTGGATAGG CTTTTGGAGA TAACAGTCAA CACTGATGAC AGGAACCAGT GAGCTTTGCT ACGTTGCTCT TC 
Length952
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15663745.. 15664906
Download Sequence
A.thaliana
AGI-codeAT3G53410.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[LUL2][LOG2-LIKE UBIQUITIN LIGASE2]
Gene coexpression
MR
MR Locus Description
10.2956 Ahg920352 Mitochondrial substrate carrier family protein
21.8174 Ahg915023 Ras-related small GTP-binding family protein
25.4558 Ahg321495 copper ion transmembrane transporters
26.9815 Ahg476195 MMS ZWEI homologue 2
27.7308 Ahg887884 glutamate receptor 2.7
35.1426 Ahg488541 heat shock factor 3
35.2136 Ahg482251 peroxisomal 3-ketoacyl-CoA thiolase 3
35.4401 Ahg345735 Prenyltransferase family protein
37.9473 Ahg325069 Calcium-dependent lipid-binding (CaLB domain) family protein
41.9643 Ahg493908 Domain of unknown function (DUF23)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression