| Annotation |
|---|
| Description | jgi|Araly1|938734|scaffold_502925.1 |
| Sequence |
TCTAGAAGCG GCGTTGAGAA GATGACGATT ACATCAAATA TCTCTGTACA GAACGACAAC CTCGTTGTTC AAGGGAAGAC TATCCTTACC AAAATCCCCG ACAACATTAT CCTTACTCCG GTTACCGGTA ATGGATTCGT TTCCGGTGCA TTTATAGGCG CGACGTTTGA ACAAAGCAAG AGTCATCATG TGTTCCCCGT CGGTGTATTG GAGGGTCTTC GATTCATGTG CTGTTTCCGG TTTAAACTAT GGTGGATGAC TCAGAGAATG GGAAGCTGTG GAAAAGACAT TCCTTTGGAG ACACAGTTCA TGCTACTGGA GAGCAAGGAT GAGGTTGAAG GAAATGGGGA TGATGCTCCG ACTATTTATA CCGTCTTTCT TCCTCTTCTT GAAGGCCAGT TCAGAGCTGT TCTCCAAGGA AATGAGAAGA ATGAGATAGA GATTTGTCTT GAGAGCGGAG ATAAGGCGGT GGAAACTAGC CAGGGAACTC ATCTCGTCTA TGTTCATGCT GGAACCAATC CCTTTGAAGT TATCAGACAA TCCGTAAAGG CTGTGGAGAG ACACATGCAG ACATTTCATC ATCGTGAGAA GAAGAAGCTT CCTTCTTTCC TTGACTGGTT TGGCTGGTGC ACATGGGACG CTTTCTACAC AGATGTGACT GCCGAAGGTG TTGATGAAGG CCTTAAAAGT CTTTCTGGAG GAGGTACCCC TCCAAAGTTT CTGATCATAG ACGATGGTTG GCAACAAATA GAAAACAAAG AGAAAGATGA AAACTGCGTT GTTCAGGAAG GAGCACAGTT TGCTACTAGG CTTGTTGGTA TCAAGGAGAA TGCAAAATTT CAGAAGAGTG ATCAGAAGGA CACACAAGTA TCAGGACTAA AGAGTGTCGT TGACAATGCG AAGCAGCGGC ATAACGTGAA GCAAGTTTAT GCGTGGCATG CTTTAGCTGG ATACTGGGGT GGAGTTAAAC CCGCTGCTTC TGGGATGGAA CACTATGATA GTGCATTAGC ATACCCAGTT CAGTCCCCAG GTGTCTTAGG GAACCAACCA GATATAGTAA TGGACAGCCT TGCTGTTCAT GGTCTCGGAC TTGTCAACCC GAAGAAAGTT TTCAACTTCT ACAACGAACT GCATTCATAC TTGGCTTCAT GTGGTGTAGA CGGAGTCAAA GTTGATGTCC AGAACATCAT TGAAACCCTC GGTGCTGGTC TTGGCGGGAG AGTCTCTCTC ACTCGTAGCT ACCATCAAGC TTTAGAAGCT TCCATTGCCC GGAACTTCAC AGATAATGGT TGCATATCTT GCATGTGTCA CAACACAGAC GGACTTTACA GCGCGAAACA AACCGCTATT GTTAGAGCAT CCGATGATTT CTACCCAAGA GATCCTGCTT CTCACACCAT CCACATTGCA TCGGTTGCAT ACAACAGCCT TTTCCTTGGA GAGTTCATGC AACCTGACTG GGATATGTTC CATAGTCTAC ACCCAACTGC AGAGTACCAT GCTGCAGCGC GTGCAGTGGG TGGATGCGCA ATCTATGTCA GTGACAAGCC AGGAAACCAC AACTTTGATC TATTGAGGAA GCTGGTTCTT CCCGATGGTT CAGTTCTTCG TGCTAAGCTT CCGGGTAGGC CTACTCGTGA CTGCTTATTC GCCGATCCAG CTAGAGATGG AATCAGCTTG CTGAAGATCT GGAACATGAA TAAGTTTACT GGTATTGTCG GTGTGTTCAA CTGCCAAGGT GCTGGTTGGT GCAAGGAAAC GAAGAAGAAC CAGATTCATG ATACTTCTCC TGGCACACTC ACGGGTTCAG TCTGTGCGGA TGATGCTGAT CTAATCTCTC AAGTGGCTGG TGAAGATTGG AGTGGAGATT CAATAGTCTA TGCTTACAGA TCAGGAGAGG TGGTAAGACT ACCAAAAGGT GCTTCAATTC CTCTCACCCT CAAAGTTCTT GAATATGAAC TCTTCCACAT TTCTCCTTTG AAGGAAATCA CTGCAAGCAT CTCATTCGCA CCAATTGGAC TGCTAGACAT GTTCAACTCA AGCGGGGCTA TCGAGTCGAT GGATATCAAT CCCGTGACCG ACAAGAAACC TGAACTCTTC GATGGAGAGG TCTCTTCGGC TTCTCCTGCG CTCAGCGATG ACCGTTCTCC AACAGCTCTG ATATCTCTGA GTGTTAGAGG CTGTGGTCGT TTTGGAGCTT ACTCTTCTCA GCGTCCACTA AGATGCACCG TTGAAAGCAC AGAGACTGAT TTCACGTACG ACGCGGAGGT TGGGCTTGTG ACTTTGAATC TGCCGGTGAC GAGGGAGGAA ATGTTCAGAT GGCATGTTGA GATTCTGGTC TAGACCAAAA AGCTCCAATG TAGT |
| Length | 2364 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 17432959.. 17436686 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G57520.1 |
| Description | seed imbibition 2 |
| TAIR curator summary | |
| Alias | [AtSIP2][RS2][SIP2][seed imbibition 2][raffinose synthase 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg495853 | xyloglucan endotransglucosylase/hydrolase 25 |
| 5.56776 |
Ahg950444 | Xyloglucan endotransglucosylase/hydrolase family protein |
| 7.07107 |
Ahg941394 | beta-amylase 3 |
| 7.4162 |
Ahg491708 | UDP-D-glucuronate 4-epimerase 1 |
| 8.48528 |
Ahg948904 | Granulin repeat cysteine protease family protein |
| 8.94427 |
Ahg484102 | endoxyloglucan transferase A3 |
| 13.1909 |
Ahg926342 | trehalose-6-phosphatase synthase S8 |
| 14.1774 |
Ahg483040 | ortholog of sugar beet HS1 PRO-1 2 |
| 18.3303 |
Ahg941577 | Raffinose synthase family protein |
| 19.0788 |
Ahg484412 | Octicosapeptide/Phox/Bem1p family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|