Detail



ID : Ahg938990

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938990|scaffold_503181.1
Sequence
TTCTCGCTTT CTTGGAAAAA ATGGCTTCTT TTGATCTTCA CGTCTCAAGC AAGATGGGCG TCCGGCCTGG TTTCGAGATC TTGGGGCCGG TTTCAGTAAA ATATTATCAG AGAGACGCTG TGCACAAGAT TTCGGAAATC CTCCAAATAT GCCCCGATGA TGCGTTTACC TTACTAAAAT GCTTCCGTTG GTGTGGAGAT CATGTTCTTG ATGGCTGGTT TGATGGACTG ATTGACACGT CCAAGTATCT CCTGTGCCCT TCTCCTAACG ATGATGAGTT CTGCTGTGGC ATTTGCTTCG ATACTCTTCC TATTCTTAAG GCTGCGCCCT CTTTGTGTGG TCACCTTTAT TGCAAAGGTT GCATGAAAGA TCATGGATCA ACTGTCCTAG ACACCAAGTG TCCACATGAG AAATGTGACA GAACCTTAGG CCTAGGTTTA GTAAAAGCAT CAGCAAGTCC TAGGGATTTC GAAAAATATC GTAGGTTTTC TATGAGGTCA TACATTGAGG ATAGTACAAC GCGGAAATGG TGTCCTTCCC CTAACTGCAA CTGTGCCATA GCACTCAAAG ATCCATCATC GATTCTGTTG GCAGGGCACT ATCCTGCAGA CTGCTCAATT GCCATTAACT GGTTGAGTTT TGAACACAAT GAGAAGTGTA ATAACTGGAA AAAAGTTAAC GCAAGACTAT GCCCTAACTG TATGAAGCCT ATCCACAGAG AAAGTGGATG CAATCACATG TCCTGTAGGT GCGGTTTTGA ATTTTGTTGG GTTTGTCTCA GAAGATGTTT TGGAGGAGGT TGGCATTACC CATGCATTCC CCCAGTGTCT ACTTCCTCGA CAGGAGTTCC AGAAGAGATG CAATTAATCC CCCCTGTTTC CGACATCGAA GTTCGCTACC GAAGTATTTT TGATCTTCGC GGGAAGATCT GCGAGAAAGC TGAAATCTAC TGCAGAACAT TCCACACTGT TCAAACCAAA ATGGCATGGT TTGAGATGCT TTATGCAATG CAGATCCGGA GATGCTTGTC GATTTCTAAG TGGATATGTG CACTCGCTAG CTTTTACGGG TTGGATCTTA ACCAATTTGT TAAGATTCAA GGAAGACGCA GAGCTGGTAT CAGGAGTGAA AGCCAAACGG GTCCAGCGTG GCACTCATTA GGCATCCCAT CTGGGCAGAT TCGTAGAAGT CAACATGCAT TGATAAACTC ATCTATAAGA ATTCTTACTC GGATGGACGC TGGTGGACAT TGGTGTTCCC GAGGACTCCT GATGGAGAGA GCAGAGTCTG CTTTACGTGC TCATAGTAGC TCTGTGAAAG GAGGTGGTAA AGTACAGGTC AAAGCTCCTG AAGATACTGC AGCTGTACCT GTAAAGTTTC AGGCTTTCAT CAAGGAACAA GTCCTTGTGA ACATCACAAT ATCTGCACGG GAGGATAAAA ATCTTAATAT TGAACCGTGG CATACTGCTG AAGAATATGA TGGTCAAGTT AGAGAGATTA AGTTCAGATC CATTTGTAAT AGTCCGATGT GTCCACCAGA CACTCCTGTG ACGGAATGGC AGCACGTTGT TCTATCACCA GAGAAGAAAG TGCTGGTTTT TGAAACTGTG CAACAGCCAC ATGATGTTCC TTTTGGTTCT TACTTTGAGG TCCACTGTCG ATGGCGCTTG GAAGCTAAAG ACGAGACTTC ATCTGTTATA GATATAAGAG TCGGTGTACA TTTCAAGAAA TGGTGTTTGA TGCAATCGAA GATTAAAGCA GGAGCAATTG ACGAGTACAA GAAAGAAGTG GAAGTGATGC TAGAAGTGGC ATTGTCGTAT CTCAAGTCAC ACTCGTCCTC AAGCAGCCTT GGTGATATAG AAAAGTCTGC TCTATCTATC ATCTCCAACA CCAGAAAACA TACGCTAAAA CCTAATTTGC CAAAATCAAA AAGCTTCTCA AAGTTTCATT CTCCAGCCAG CCAATTAAAG ATCATCCAGC GTCATTATTC TTCTTCTTTT ATCTTATTAA AGTGTATATG TGGAAAAGGT AACTAGAACG GATATTTTCT GGAACCCGT 
Length2059
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18384808.. 18390468
Download Sequence
A.thaliana
AGI-codeAT3G59660.1
DescriptionC2 domain-containing protein / GRAM domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
27.3313 Ahg919779 branched-chain amino acid transaminase 2
38.8844 Ahg934176
60.208 Ahg948739
63.6867 Ahg932721
64.1872 Ahg344726
69.2459 Ahg917601 phosphatidylinositol-speciwc phospholipase C5
78.5748 Ahg482001 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
79.5236 Ahg487053 glutathione transferase lambda 1
83.4446 Ahg943308 glycosyltransferase family protein 28
94.2868 Ahg352314 Copper amine oxidase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression