Detail



ID : Ahg939382

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939382|scaffold_503573.1
Sequence
CACCTCTCTA GACTCTAGAC AATGAATAGC TCGATGACTA CGAGTCCAAC GGCTCGAGCC TTCCTTCATC TTCACTCGTC ACCATTCACT TTACGTTCTA GGCAGCCACC GGCTGGAGTA TGTCTAGTCT CGTGGCCGCC TTCTCCGTCT CGCAGGACTC GACGACTCGT CTGTATGGCC GAACCTTACC TCATTAGGAA AATGGAGTCT GTGGAGAAGA CATGGAAGGA GTTATCGGTA AAACTAGCTG ACCCAGATGT TGTTTCGAAT CAATCTGAAT ACCAAAAACT GGCACAATCC ATGTCGGAGC TTGACGAGGT TGTAACAGTC TTCAGAAGAT TCAAGGACTG TGAGAAGCAG TTACTAGAAA GCAAAGTTTT GGCGAAAGAG GCTGGAGATG ATGAAGATAT GGCTGAAATG ATAGGAAGTG AAATCAACTC GCTCACTAAA GAAATTGAGG AGCTTGAAAA ACAACTTAAG GTGTTACTTC TTCCTTCCGA TCCTCTTGAT GCCAGAAACA TTTTGCTCGA AGTTAGAGCA GGAACTGGTG GCGATGAAGC TGCAATTTGG ACTGGTGACC TTGTGCGGAT GTATCAGAGG TACAGCGAGC GCAGCTCTTG GAAGTTTTCA ATGGTTTCAT GCTCAGAGGC TGAACATGGT GGTTACAAGA CGTGTGTGAT GGAGATTAAA GGAAATCGTG TCTATAGCAA GCTCAAGTAC GAATCTGGTG TTCATCGAGT CCAGCGTGTT CCTCAAACAG AAACACAGGG TCGTGTACAC ACTTCTACAG CAACTGTAGC CATCATGCCA GAGGCTGATG AAGTGGAAGT GGTGATTGAC CCAAAGGATA TTGAACTTAC ATCTGCAAGA TCTGGCGGCG CTGGAGGGCA AAATGTGAAC AAGGTGGAGA CGGCTATAGA TCTATTCCAC AAACCGTCAG GTATTCGCAT TTTCTGTACA GAAGAAAGGA CTCAGATTAG GAATAAGGCT CGTGCTTTCC AGCTTCTGCG AGCAAAACTG TATGAAATAA AAGTAAGGGA ACAACAAGAG AAGATAAGGA ATGAAAGGAA ATCTCAGGTT GGGACTGGAG CTCGTTCAGA AAAGATAAGA ACATACAATT ATAAGGACAG TAGAGTGACT GATCATAGGC TAAAGATGAA CTTTGCGCTT ACATCATTTC TTGACGGTGC TTTAGAGGAC GCAGTGCAGG CTTGTGCTGC TTTGGAGCAA AAGGAACTCA TGGAAGAACT CTCCGAGTCT GTAGCTGCTT CTTGATAATT CCTTACACTA AACTAA 
Length1296
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19825035.. 19827812
Download Sequence
A.thaliana
AGI-codeAT3G62910.1
DescriptionPeptide chain release factor 1
TAIR curator summaryIsolated in a screen for chloroplast development mutants. Pale green, albino seedlings arrest early in seedling development.
Alias[APG3][AtcpRF1][cpRF1][ALBINO AND PALE GREEN][Arabidopsis thaliana chloroplast RF1][chloroplast ribosome release factor 1]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg337713 ABC transporter family protein
14.6287 Ahg475075
18.5742 Ahg472396 plastid transcriptionally active 6
22.2711 Ahg494796 Insulinase (Peptidase family M16) family protein
23.6643 Ahg330061 CRM family member 3B
26.6833 Ahg946135 RAB GTPase homolog E1B
27.2947 Ahg470732 fructose-2,6-bisphosphatase
27.3861 Ahg939414 ribosome recycling factor, chloroplast precursor
33.6155 Ahg933276 NAD(P)-linked oxidoreductase superfamily protein
33.8821 Ahg485468 Protein of unknown function (DUF3353)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression