Detail



ID : Ahg939856

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939856|scaffold_600400.1
Sequence
GCAAAGCAGG TTGAGAGAGG ATGGTTTCAG AGACTTGGTT TCGTAATCTG TGGAGGTTTC CAAAGAAACA TGATGTTCAT AAAGATAAGG CGGTGCTCGG AGTATTAGCG TTTGAGGTTG CGAGTTTGTT GTCGAAGCTT GTTCATTTGT GGCAGTCACT AAGTGATAAG AATGTTGCAA GGCTTAGGGA CGAGATTACG CATTCCACCG GTATAAAGAA GCTAGTTTCA GAGGACGATG ATTTTATCGT CAGGTTGATA CGCGATGAAA TGATGGAGAA CGTTGAGAAT GTAGCGAAAG CTGTTGCTAG GCTTGCGAGG AAATGCAACG ATCCCAAGTT GAAATGCTTT GAGAATTGTT TTAGTGATAT GATGAAGACT GGAGCTGACC CTTATGGGTG GCAGTTTGGG TGGAAGAAAA TGGATAAGAA AGCAAAGAAA ATGGAACGTT TCATCTCATC AAATGCTAGC CTCTACCAGG AGACTGAGAT TCTGGCCGAT CTTGAACAGA CTTTCAAGAG AATGAAGAGC AATGAATCTG CAACTGACAA TCTTTTGGAG TATCAGAAAA AAGTTACATG GAAAAGACAT GAAGTGAAGA ATCTGCGGGA TGTGTCTCTT TGGAACCGTA CTTATGACTA TACCGTCCTT CTCTTGGTTA GATCAGTTTT CACAATCCTT AGCAGGACTA AACATGTTTT TGGCTTGAGT TACAGAATGG AAGCAAGTGA TGTTAGCTCT GCAGATTCTG ATTTCATTGG CCGCAGCCAC TCGGTTTCTA CAATTTTAAC TCCTGTATCT CATAAATCTG AGACTAGCGG TCTTCCTAGA TTTGCTTCTG GTCCCCTTGG AAGATTTACC GGTCCAGCAT CAGGTTCAGC TGCTACAAGG TCCACGAAGA TGAGTGATTT CCTTTCCGGT TCTCTCAGCG CCGAATCCCC TAAGTCAGGT CCTCTTGTTG CAGAAAAACA CAAACGTTTC AAGTTTTACT CAGGCCAGCT CGGGAAAATC ACCTCCAAAT CAGGACCACT TATCGGAATG GGCAAAAACA ACAAGAAGAT GGGGCAGACA CCGGAAAGAC CTTCAATTTC CTCAGTGAAA AAGCAATTGA AAGCCAACCG GTTAACACAG GTTGGCCCGT TTAAAGGCTG TATGGTGTCT CACGATGGGA TTACTCCTCT CAGCACTAAG ACCCGGAATG GAGCTAGGAA TAGTAGTGCT GAGCATCACA TTCTTGAAGG AAATTCTAAC TCTGTCCACG TTGAAAACTT GACACTTCCT ACCCGACCTA AGTTGTCAGA TGCTGCTCCT AATACCCTTG GTGCAGCTTG CTTAGCATTA CACTATGCAA ATGTCATCAT CGTGATAGAG AGATTTGTTG CATCTCCTCA CTTGATAGGC GATGATGCAA GAGACGACCT TTACAACATG TTACCGGCGA GCGTGAGAAC ATCGCTTAGA GAAAGGCTAA AACCGTACTC GAAAAACTTG AGTTCTTCCA CAGTTTATGA TCCAGGACTA GCAAAAGAAT GGACAGACGC AATGGCGGGT ATCTTGGAAT GGTTGGGTCC ATTAGCTCAC AACATGATAA AATGGCAATC TGAGCGGAGT TACGAGCACC AAAGCTTGGT TTCAAGGACG CACATAGTTC TTGCACAAAC CCTTTTCTTT GCAAACCAGC AGAAGACAGA AGCCATCATT ACCGAGCTTC TTGTTGGCCT CAATTATGTC TGGAGATTTG GCAGAGAACT TAACGCCAAG GCTCTTCAGG AGTGTACCAG TAGTAAAACC CTTGAGAAAT GCTTGGACAC AGATAACTAG TGAGGACGAC ACACCCAAGT CT 
Length1842
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1484480.. 1486313
Download Sequence
A.thaliana
AGI-codeAT5G04550.1
DescriptionProtein of unknown function (DUF668)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg480961 Protein of unknown function (DUF803)
4.47214 Ahg483746 transcription regulatory protein SNF2, putative
7.2111 Ahg926218 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
7.54983 Ahg897634 Ubiquitin carboxyl-terminal hydrolase-related protein
7.74597 Ahg941602 alpha/beta-Hydrolases superfamily protein
10.6771 Ahg483345 P-loop containing nucleoside triphosphate hydrolases superfamily protein
10.8167 Ahg484193 ammonium transporter 1;1
11.225 Ahg482295 hydroxyproline-rich glycoprotein family protein
11.3137 Ahg493490 phytoene desaturase 3
12.9615 Ahg488073 dgd1 suppressor 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression