Detail



ID : Ahg940337

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940337|scaffold_600881.1
Sequence
GAAAGCATCT TTCTGCGAAT ATGGCGCCTC CGGCAAGTGA AACAGCTGCG GTGGTTGACG GCGGTGATGG GCAGCAGCAA CGACAAGCTG GTGGGTTTGG GCAGGCAATT ACCGGAATCA TTAGAATCGC CGTCTTCTGC TACTTTGCTT CTAAGTTCTT TTCTCCGAAA CAAAAACCAT CGGATCCTTC TAAGCCTTCT CATCTTATGT CCAATCTCTT TCAGAGGGGA GAGCCCATGG ATATGTGGTT TTATCTTTCG GAGCATGAGA AATTCAATGA CTTTGGCAAT GAAGGTGCGC TTATTTGGCA CGAGACAAAC ATACCTTATG CTGTGTGGAA GCCAGAGAGC ACTAGGACCT TGTCAATGAC ATATTATCCA TCCGAGGCAC TGAAGAATAA TGGAAGTCTG TATGCTCATG TCTTCTTTGC TCGATCTGGT TATCCTATAG ATCCTAGTGA TCCTGAATAC CAGCCTCTTA ACTGCTTTGG CAGGACACAC CCCATTGCAA CTTACTTACC AAAGCGAAAA GCAGATAAGA AGAAGAGTCT GTTGGGAAAT CCCAAAGACG ATGATGAATC CAATGTTGAA GTTGAGGAGG TTGATGGTAA GGACTCGGAT CTCAAGGATG AGGGACCTGT GGAATGGGTT TCCTACTGGA AACCAAATGT CACAATTAAC CTAGTCGATG ACTTTACTCG CTATCCACAG CATGGTGTAC CACCAAACAT TGATCCTTAC TTACTGGTGG AACCTAGTAC AGTAAACTAC TACCCTACAG TTTTCTTTAA TGAGTTTTGG CTGCTAAGGG ACAAGTTGAT TTTAATCAAT GAGACGGTCT CAGAGCTGCC ACTTAATCTG GAAGTAAGCC CCATAAGCAT GACAAAGTGG CAGCTGTTTC AGCAGATTGA TCAGTCTTTT CAGATTCACC GTAGCTATGG AAGCATGCTT GATGGTGAAT CTGACGAACT AAAGAGGGTG TTTTTGGAAG GAAATCCCTA TCTCTTGGGT GTCACAATGT TTGTTTCGAT GCTTCATTCT GTATTTGACT TCCTTGCATT CAAAAATGAT ATCCAGTTTT GGAACAAGAA CAAATCTATG GAAGGACTGT CTGCGAAGTC TGTCGTACTA AACTTTATCT GTCAGTTTAT CATCTTCCTC TACCTGCTTG ACAACGACAC TTCTTGGATG ATACTGGCTA GCTCCGGAGT TGGTGTCTGC ATCGAGTTCT GGAAAATAGG GAAAGCCATG CGGATTGAGG TTGATCGAAG TGGGATGATT CCAAGATTGA GGTTCCACGA CCGTGAATCC TATGCAAGCA ACAAGACCAA GGAGTATGAC GACATCGCCA TTAAATTCTT ATCCTATGTG CTCCTCCTCC ATGTTGTGGG TTTCTCCATA TATTCACTTG CCTATGAACG CCACAAGAGC TGGTACTCAT GGATCCTATC TTCACTAACG AGCTGCGTCT ACATGTTTGG TTTCATAATG ATGTGTCCTC AATTGTTCAT CAACTATAAG CTGAAGTCAG TAGCACATTT ACCATGGAGG CAAATGACAT ATAAGTTCCT CAACACAATC ATCGACGATC TCTTTGCTTT TGTCATCAAA ATGCCAATGC TGCATCGCAT TTCTGTCTTC CGAGATGATG TGATATTCTT AATATACTTG TACCAGAGAT GGGTTTATCC TGTGGACAGA ACACGTGTCA ACGAATTTGG TTTTGGAGGT GAGGATGAGT CTGTGGATAC AAAGAAGATC TCTGACCAAG AAGATGACAA GAAAACAAAC TAATTAGCTT TGTGCTTTTG TTC 
Length1813
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3209517.. 3231556
Download Sequence
A.thaliana
AGI-codeAT5G08500.1
DescriptionTransmembrane CLPTM1 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg922978 methionine aminopeptidase 2A
71.7635 Ahg316935 Spc97 / Spc98 family of spindle pole body (SBP) component
75.8683 Ahg495299 CAP160 protein
94.6573 Ahg950332 profilin 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression