Detail


ID : Ahg941687

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941687|scaffold_602231.1
Sequence
TCGTCGTTGT CTCGCCGGAG AAAATGGCGA CCAATCTTCT CCGATGTCCT CTTCCTCCGC CGTCGAGTCT TCATATTCGT CCAAGTAAGT TCCTCGACGT CAAATTCGTG AACCGATGCT TTCCAAGACA GCGCCGTTCT CGTATCCGGC GGCACTGTTC AACACCTGGT TTATTGGTAT CAAACTCGGT CGAGATAAGT ACTCAATCGT TTGAATCTAC GGAATCTTCA ATCGAATCTG CAAAATCTGT TACGAGCGAC ACCCCTATTC TCCTCGAAGT GAGTGGGATG ATGTGTGGTG GCTGCGTCGC CCGGGTTAAA TCGGTTTTGA TGTCTGATGA CCGAGTCGCG TCTGCTGTGG TTAACATGCT GACTGAAACA GCGGCGGTGA AGCTTAAACC GGAGGTTGAG GTGACGGCGG ATGCGGCGGA GAGTTTAGCT AAGAGATTGA CAGAGAGTGG TTTTGAGGCT AAGAGGAGAG TCTCGGGGAT GGGAGTGGCG GAGAATGTGA AGAAGTGGAA GGAGATGGTG AGTAAGAAAG AGGACTTGCT TGTTAAGAGC AGGAACCGTG TGGCGTTTGC GTGGACATTG GTGGCTCTGT GTTGCGGGTC TCACACTTCG CATATTCTTC ATTCCTTGGG AATTCATATT GCTCATGGAG GGATTTGGGA TTTGCTACAC AACTCTTACG TGAAAGGTGG TTTGGCAGTT GGAGCTTTGT TGGGACCAGG AAGAGATTTG CTGTTTGATG GCATAAAGGC TTTTGGGAAA AGATCACCTA ATATGAACTC GTTAGTTGGA TTGGGATCTA TGGCTGCATT TTCCATCAGT TTGATCTCAC TAGTTAATCC AGAACTGGAG TGGGATGCTT CCTTCTTTGA GGAACCGGTC ATGCTGCTTG GCTTTGTGCT CCTTGGTCGT TCTTTGGAAG AAAGAGCAAA GCTTAAAGCA TCTAGCGATA TGAATGAACT ATTGTCACTC ATCTCCACTC AGTCAAGACT TGTGATTACT TCATCTGACA ATAACACCGC AGCTGATTCT GTACTTTCCT CTGATTCAAT TTGCATCAAT GTCTCTGTTG ATGATATCCG AGTTGGAGAC TCGCTGTTGG TTTTGCCTGG TGAAACATTT CCTGTCGATG GGAGTGTCCT AGCTGGAAGA AGTGTTGTGG ATGAATCTAT GCTGACAGGA GAGTCACTTC CCGTGTTTAA AGAAGAAGGC TGCTCAGTTT CAGCGGGAAC AATAAACTGG GATGGCCCTC TACGGATCAA AGCTTCTTCC ACTGGTTCCA ACTCGACGAT ATCTAAAATT GTCAGAATGG TTGAGGATGC ACAAGGTAAT GCAGCTCCTG TACAGAGGCT GGCAGATGCA ATAGCTGGAC CCTTCGTCTA TACTATAATG TCTTTATCTG CAGTGACGTT TGCCTTCTGG TATTACGTTG GTTCACACAT ATTCCCAGAT GTTTTACTCA ATGATATTGC TGGACCTGAT GGAGATGCTC TGGCCTTAAG CCTAAAACTG GCCGTGGATG TCTTGGTAGT TTCCTGTCCC TGTGCGCTGG GCCTTGCAAC ACCAACTGCC ATATTAATTG GCACCTCTCT TGGAGCAAAG CGGGGATATC TTATCAGAGG AGGAGATGTC TTAGAACGTC TGGCTTCCAT AGATTGTGTG GCTTTAGACA AGACAGGAAC TCTTACTGAA GGAAGACCTG TCGTCGCTGG TGTTGCTTCT CTAAGATACG AAGAACAAGA AGTTCTTAAA GTGGCTGCTG CGGTGGAGAA GACAGCAACA CACCCAATAG CAAAGGCTAT TGTAAACGAG GCAGAATCTC TGAATCTGAA AACTCCAGAA ACAAGAGGCC AACTGACAGA ACCAGGCTTT GGTACTTTGG CAGAAGTAGA TGGACGTTTA GTTGCAGTGG GTTCACTTGA GTGGGTTTCT GATCGTTTCC TCAAAAAGAA CGACTCCTCA GACATGGTGA AGCTGGAAAG TTTTTTGGAT CATAAATTAT CAAACACATC ATCAACGTCT AGGTATTCGA AGACTGTTGT TTACGTTGGC CGTGAAGGAG AAGGGATTAT TGGTGCTATT GCAATATCCG ATTGCTTACG CCAAGATGCT GAATTTACTG TAGCCAGACT GCAGGAGAAG GGCATCAAAA CAGTCCTCTT ATCAGGGGAC AGGGAAGGGG CAGTGGCAAC TGTGGCAAAG AATGTGGGGA TTGAGAGTGA ATCAACCAAT TATTCCTTGT CTCCGGAAAA GAAATTTGAG TTTATAACTA ATCTTCAATC CTCTGGACAT CGTGTTGCTA TGGTTGGTGA TGGCATAAAC GATGCTCCCT CGTTGGCTCA AGCTGATGTT GGAATAGCTC TAAAGATCGA GGCACAAGAA AACGCTGCAT CAAATGCAGC ATCAGTCATA CTTGTCCGCA ACAAACTTTC ACATGTTGTG GATGCACTGA GTCTTGCACA AGCAACTATG TCGAAAGTAT ATCAGAATCT AGCATGGGCA ATTGCGTATA ATGTCATCTC AATCCCTATA GCTGCAGGTG TCTTGCTTCC TCAGTATGAT TTCGCCATGA CACCTTCCTT ATCCGGTGGA CTAATGGCAT TGAGCTCGAT CTTCGTCGTT TCAAATTCAT TACTTCTCCA GCTCCATAAA TCTGAAACAA GTGGAAACAG CTTGTGATCG GCTCACCACA GCAGAAG
Length2707
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8619412.. 8625204
Download Sequence
A.thaliana
AGI-codeAT5G21930.1
DescriptionP-type ATPase of Arabidopsis 2
TAIR curator summaryP-Type ATPase, mediates copper transport to chloroplast thylakoid lumen. Required for accumulation of copper-containing plastocyanin in the thylakoid lumen and for effective photosynthetic electron transport
Alias[ATHMA8][HMA8][PAA2][ARABIDOPSIS HEAVY METAL ATPASE 8][HEAVY METAL ATPASE 8][P-type ATPase of Arabidopsis 2]
Gene coexpression
MR
MR Locus Description
2 Ahg924442 Polyketide cyclase/dehydrase and lipid transport superfamily protein
10.0995 Ahg929130 beta galactosidase 1
10.583 Ahg947934 Malectin/receptor-like protein kinase family protein
11.4891 Ahg474507 STRUBBELIG-receptor family 6
11.7473 Ahg475792 SHV3-like 2
12.3693 Ahg486045 Protein kinase family protein
16.1245 Ahg920472 Inorganic H pyrophosphatase family protein
18 Ahg481966 Phototropic-responsive NPH3 family protein
19.6723 Ahg335224 Pentatricopeptide repeat (PPR-like) superfamily protein
21.2132 Ahg937931 photosystem II subunit O-2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression