Detail



ID : Ahg943721

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943721|scaffold_604265.1
Sequence
TATAATTTCA TTCAATTGAT ATGGATGTAT CCAACACGAT GCTGCTTGTA GCTGTTGTTG CAGCTTACTG GCTATGGTTC CAGCGGATCT CACGATGGCT AAAGGGTCCA CGTGTCTGGC CAGTGTTGGG CAGTCTTCCT GGTCTGATCG AGCAGCGTGA CCGTATGCAC GAGTGGATCA CTGAGAACCT CCGTGCGTGT GGCGGCACTT ACCAGACATG TATCTGCGCC GTGCCTTTCT TGGCAAAGAA GCAAGGTCTC GTGACCGTCA CGTGTGACCC CAAGAACATC GAGCACATGC TCAAGACCAG GTTCGACAAC TACCCTAAAG GTCCTACGTG GCAAGCCGTG TTCCATGACT TCCTCGGCCA GGGCATCTTC AACTCCGACG GTGACACTTG GCTCTTCCAG CGTAAAACCG CCGCTCTTGA ATTCACCACT AGGACGTTGA GGCAAGCGAT GGGTCGGTGG GTGAACCGGG GAATTAAGCT CCGTTTCTGT CCGATTCTTG AGACGGCTCA GAACAATTAC GAGCCGGTTG ATCTCCAAGA CTTAATACTT CGGCTCACAT TCGACAACGT TTGCGGTTTA GCATTCGGTA AGGACACTCG AACCTGCGCA CCGGGACTTC CCGAGAACGG TTTCGCCACG GCTTTCGACC GAGCCACCGA AGCCTCTCTA CAGCGGTTTA TTCTACCGGA GTTTCTATGG AGGCTGAAGA AATGGCTTGG GCTCGGCTTA GAAGTCAGCT TGAGCCGGAG CTTAGGAGAG ATCGATGGGT ATTTAGATGC TGTCATTAAT ACACGTAAGC AAGAATTGCT GAGTCAGCAA GAAAGCGGGG TCCAGCGACA CGACGATCTC CTCTCTCGTT TCATGAAGAA GAAAGATCAG TCCTACAGCG AGACGTTCTT ACGACACGTG GCTCTTAATT TTATCCTTGC TGGACGTGAC ACGTCATCAG TAGCGTTGAG CTGGTTTTTC TGGCTCATCA CGACGCATCC GACGGTCGAG GATAAGATCG TCCGCGAGAT ATGCTCCGTT CTGATTGAGA CACGTGGAAC CGATGTATCG TCGTGGACGG CGGAGCCGTT GGAATTCGAT GAGGTGGACC GGTTGGTTTA CCTGAAGGCG GCGCTCTCCG AGACGTTGAG GCTTTACCCG TCGGTGCCGG AAGATTCGAA GCACGTCGTG AACGATGATA TCTTGCCGGA CGGAACTTTT GTACCGGCGG GATCGTCGGT GACTTATTCG ATCTACGCGG CGGGGAGGAT GAAGAGCACG TGGGGCGAGG ATTGTCTGGA ATTTAAGCCG GAGAGGTGGA TTTCGCCGGA CGATGGGAAA TTCGTGAATC ACGATCAGTA TCGATTCGTG GCGTTTAACG CCGGACCAAG GATCTGTCTA GGAAAAGATC TAGCGTATCT GCAGATGAAG ACGATCGCGG CGGCTGTTTT ACTCCGGCAC AGACTGACGG TGGCGGCGGG ACACAAGGTG GAGCAGAAGA TGTCGTTGAC TTTGTTCATG AAGAACGGAC TTCTGGTCAA CGTGCACAAG AGGGATTTGG AAGTGATGAT GAAGAGTCTC GTAACCAAAG AGAGAAACGA CGTCGTTGTT CTTAACGGGA AATGCAACGG CGGTATCGGT GGTGAAGGCG TCGCCGTTAA TGCGGCTGTG GCGGTTGCGG TGTAATGCGG CATTTCGGGT TGATG 
Length1705
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23322377.. 23324264
Download Sequence
A.thaliana
AGI-codeAT4G00360.1
Descriptioncytochrome P450, family 86, subfamily A, polypeptide 2
TAIR curator summaryEncodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.
Alias[ATT1][CYP86A2][ABERRANT INDUCTION OF TYPE THREE 1]["cytochrome P450, family 86, subfamily A, polypeptide 2"]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg891467 alpha/beta-Hydrolases superfamily protein
6.85565 Ahg918858 3-ketoacyl-CoA synthase 1
8.7178 Ahg471022 Protein of unknown function, DUF538
11.4891 Ahg470401 AUX/IAA transcriptional regulator family protein
12.49 Ahg888769 pectin methylesterase 44
14.6969 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
17.1464 Ahg491144 catalase 2
18.1659 Ahg472589 glutamate:glyoxylate aminotransferase
18.4391 Ahg485226 HXXXD-type acyl-transferase family protein
19.8746 Ahg923635 ABC-2 type transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression