Detail



ID : Ahg944486

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944486|scaffold_700715.1
Sequence
TAGAGAAAGA ATCATCAAAA ATGGGAATAA TGGAGGCAGA GAGGAAAACA ACAGGCTGGG CTGCAAGAGA TCCATCTGGG ACTCTCTCTC CTTACACTTA CACTCTTAGA GAGACTGGAC CAGAGGATGT GAACATAAGA ATCATTTGCT GTGGAATCTG CCACACTGAT CTTCATCAAA CCAAAAATGA TCTTGGCATG TCTAACTACC CCATGGTTCC AGGGCATGAA GTGGTAGGTG AAGTGGTGGA GGTTGGATCA GATGTGAGCA AGTTCACTGT AGGTGACATA GTTGGAGTTG GTTGCCTCGT TGGATGTTGC GGAGGTTGTA GCCCTTGCGA GAGAGATCTG GAACAGTATT GTCCAAAGAA GATTTGGAGC TACAACGATG TTTACATCGA TGGTCAACCT ACACAAGGCG GGTTCGCTAA AGCCACCGTC GTTCACCAAA AGTTTGTGGT GAAGATTCCA GAAGGAATGG CGGTTGAGCA GGCTGCGCCA CTACTGTGCG CTGGTGTGAC GGTGTATAGT CCACTGAGCC ACTTCGGTCT GAAACAACCA GGCCTAAGAG GAGGCATACT AGGGTTAGGT GGAGTTGGTC ACATGGGTGT GAAAATAGCC AAAGCAATGG GTCACCATGT GACTGTCATT AGCTCATCAA ACAAGAAGAG AGAAGAGGCT CTGCAAGACC TTGGAGCTGA TGATTACGTG ATCGGATCTG ACCAAGCAAA GATGAGCGAA TTGGCTGATT CGTTGGATTA CGTAATTGAC ACGGTTCCTG TTCATCACGC ACTTGAGCCT TATTTGTCTC TGCTTAAGCT TGATGGGAAG CTTATTCTCA TGGGAGTTAT CAACAATCCC TTGCAGTTTC TTACTCCTCT GCTTATGCTT GGGAGGAAAG TGATAACGGG GAGCTTCATA GGGAGCATGA AGGAGACAGA GGAGATGCTT GAGTTCTGTA AAGAAAAGGG ATTGAGTTCG ATCATCGAAG TTGTGAAGAT GGATTATGTT AACACTGCGT TTGAGAGACT CGAGAAGAAC GATGTGCGTT ATAGGTTCGT CGTTGATGTC GAAGGAAGCA ATTTCGACGC TTGAATTCAT GAAAACTCGA GGCT 
Length1114
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2697947.. 2699690
Download Sequence
A.thaliana
AGI-codeAT4G34230.1
Descriptioncinnamyl alcohol dehydrogenase 5
TAIR curator summaryEncodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use sinapyl, caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.
Alias[ATCAD5][CAD-5][CAD5][cinnamyl alcohol dehydrogenase 5]
Gene coexpression
MR
MR Locus Description
3 Ahg495497 O-methyltransferase 1
6.32456 Ahg470210 S-adenosylmethionine synthetase 1
9.74679 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
10.6771 Ahg470785 Tetratricopeptide repeat (TPR)-like superfamily protein
11.225 Ahg923657 4-coumarate:CoA ligase 1
18.7083 Ahg479940 beta-amylase 1
20.7364 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
22.6274 Ahg939957 Peroxidase superfamily protein
23.9165 Ahg490909 conserved peptide upstream open reading frame 49
31.5278 Ahg944040 elicitor-activated gene 3-2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression