| Annotation |
|---|
| Description | jgi|Araly1|935733|scaffold_403721.1 |
| Sequence |
ATGCAAAAGG TCTTCTTGGC CATGGATACG TGTGCTCTAG TTATCCATCA GTCTCTGTCT CGCATCAAAC TTTCTCCTCC CAAATCTTCT TCTTCTGGTT TCTCTCTTGA ATCTCTACCG ATCAGACGGA TCCAGCTGTG TTTCCGAGGA GCAAGATGTG CCGCCGTACA AAAAAACTAC GAAGAAACGA CCTCCTCCGT GGATGAGGAA GACGATGATG ATGAGTCATC GTACGGAGAA GTGAAGAGGA TCATTGGAAG TCGAACGGCG GCGGAATTAG GAGCCATGGA GTATCTTATC GAGTGGAAGG ACGGCCATTC TCCGTCGTGG GTTCCATCGA GCTACATCGC AGCAGACGTG GTGTCGGAGT ACGAGACACC CTGGTGGACG GCAGCTAGGA AAGCCGACGA GCAGGCCCTG TCACAGCTTC TGGAGGACCG AGACGTCAAC GCCGTAGACG AGAACGGCAG GACGGCTCTG CTTTTCGTGG CAGGTCTGGG GTCAGACAAG TGCGTAAGGC TTCTGGCGGA GGCTGGAGCC GATCTCGACC ACCGAGACAT GAGGGGGGGC TTGACGGCGC TGCACATGGC GGCTGGTTAC GTGAAGCCGG AGGTGGTGGA GGCGCTGGTG GAGCTGGGCG CTGATATTGA AGTGGAAGAC GAGAGAGGGT TAACGGCGTT GGAACTAGCG AGGGAGATTC TGAAGACGAC GCCAAAGGGG AATCCGATGC AGTTCGGGAG GAGAATTGGG TTAGAGAAAG TGATCAATGT CCTCGAAGGA CAAGTGTTCG AGTACGCGGA GGTGGAGGAG ATCGTAGAGA AACGAGGGAA AGGCAAAGAC GTTGAATATC TGGTCAGATG GAAGGACGGT GAAGATTGCG AGTGGGTGAA AGGCGTACAC GTGGCGGAAG ATGTGGCCAA GGACTACGAG GATGGGCTGG AGTACGCTGT AGCAGAGAGG GTGATCGGGA AGAGGGTGGC AGACGATGGG AAGACCATCG AGTATCTTGT CAAATGGACT GATATGTCTG ATGCCACTTG GGAGCCTCAA GACAATGTCG ACTCTACACT TATTCTACTC TACCAACAAG AACAAGAACA ACAACAACCA ATGAATGAAT GATTGATTTT CATGATGATA TTC |
| Length | 1143 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 21862373.. 21863511 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G47450.1 |
| Description | chloroplast signal recognition particle component (CAO) |
| TAIR curator summary | A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1. |
| Alias | [CAO][CPSRP43][CHAOS][CHLOROPLAST SIGNAL RECOGNITION PARTICLE 43] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.48331 |
Ahg945228 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 17.1464 |
Ahg929130 | beta galactosidase 1 |
| 18.3303 |
Ahg475445 | Glutamyl-tRNA reductase family protein |
| 18.3303 |
Ahg476582 | Pyridine nucleotide-disulphide oxidoreductase family protein |
| 20.1494 |
Ahg476441 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 25.0998 |
Ahg471443 | glyceraldehyde 3-phosphate dehydrogenase A subunit 2 |
| 25.923 |
Ahg951055 | H(+)-ATPase 11 |
| 27.8209 |
Ahg925322 | sigma factor A |
| 28.0713 |
Ahg951910 | photosystem II subunit T |
| 28.4605 |
Ahg937931 | photosystem II subunit O-2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|