Detail



ID : Ahg932325

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932325|scaffold_400313.1
Sequence
GACACAGAGA GTATCCACCG ATGGAATCCG CAGCTACGGC TGGTGTTCCC ACTCCGGTAG CCGCCGCCAC CACCATCACC GATGATAATC TCCAATCGAT CGACTCATCA TCTCCCGCCG ACGCCGTTAA CCGATTGATC CACGCCGTTT CGCAGCGACA ACAACACCTT CTCGACAAAA CGGTGCCTCA CGTTCTCTAT CGGTGGATCG GTTGCCTCTG TGTCGTATTG ATCTACTTCG TTCGTGTTTA CTTTGTGGAA GGCTTCTACA TCATCACTTA CGCCATCGGA ATCTACCTTT TGAATCTCAT CATTGCTTTT CTTTCTCCTC AAGAAGATCC TGAAGCTTCT CTCACTACCG GTGGTTCTCT TCCTACTCGG AGATCCGATG AGTATCGTCC TTTTGTTCGC CGTCTCCCTG AGTTCAAATT CTGGTTATCG ATCATAAGGG CATTCATCAT CGGATTTATG ATGACGTTCT TCGACGTGTT TGATGTACCT GTTTTCTGGC CAATACTTCT TTTCTACTGG GTGATGTTGT TTTTCCTTAC GATGAGGAAA CAGATACAAC ATATGATCAA ATACAGATAT GTTCCTTTCT CTTTCGGGAA AAAGCAGTAT GGAAAGAAAC CGGCTCCAAC AGAGAGCAGT GAATGATCGA TCAAACTGTT CAGGTC 
Length676
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT2G23310.1
DescriptionRer1 family protein
TAIR curator summaryEncodes AtRER1C1, a Golgi membrane protein involved in returning the molecules that are exported from the endoplasmic reticulum (ER) to the Golgi apparatus back to the ER (a mechanism known as retrieval). There are two Arabidopsis homologues of AtRERC1: AtRER1A and AtRER1B.
Alias[ATRER1C1]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg945361 RNA-binding (RRM/RBD/RNP motifs) family protein
4.89898 Ahg484755 RNA-binding KH domain-containing protein
8.48528 Ahg490734 Galactose oxidase/kelch repeat superfamily protein
8.94427 Ahg921765 nuclear transport factor 2A
9.53939 Ahg920619 ubiquitin-specific protease 15
13.4164 Ahg470774 Transcription factor IIA, alpha/beta subunit
20.6155 Ahg927805 NADH-ubiquinone oxidoreductase-related
22.6274 Ahg470624 SKP1/ASK-interacting protein 16
23.4307 Ahg487814 26S proteasome regulatory subunit, putative (RPN5)
25 Ahg482061 embryo defective 1381
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression